RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 DAPL1A0PJW8 107 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 OR6C6A6NF89 314 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 E7EQL1 145 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 H0YJX3 145 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 H0YL77 283 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 ABCD4O14678 606 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 CTDSPLO15194 276 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 SGCEO43556 437 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 TFF1P04155 84 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 CST2P09228 141 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 ACSM4P0C7M7 580 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 HSMCR30P0CW71 290 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF823P16415 610 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 PSMB1P20618 241 aaKnown RBP3.05□□□□□ -1.92
COL9A1-206ENST00000470652 PCMT1P22061 227 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 CRYGSP22914 178 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 STOMP27105 288 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 CRABP1P29762 137 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 ATP6V1E1P36543 226 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 TGM4P49221 684 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 UBE2NP61088 152 aaKnown RBP3.05□□□□□ -1.92
COL9A1-206ENST00000470652 HIST1H3AP68431 136 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 NAAAQ02083 359 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 EMX1Q04741 257 aaPredicted RBP3.05□□□□□ -1.92
COL9A1-206ENST00000470652 SLC3A1Q07837 685 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 IL18R1Q13478 541 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 MED21Q13503 144 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 SSX1Q16384 188 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 PCK2Q16822 640 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 Q1RN00 199 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 GSG1Q2KHT4 349 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 RNF212Q495C1 297 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 NHLRC3Q5JS37 347 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 GLYATL3Q5SZD4 288 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 ATAD3CQ5T2N8 411 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 HIST2H3PS2Q5TEC6 136 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 FAM27BQ5VT28 67 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 LIPNQ5VXI9 398 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 ARL9Q6T311 187 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 HIST2H3AQ71DI3 136 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 GID4Q8IVV7 300 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 OR5AS1Q8N127 324 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 STX19Q8N4C7 294 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 YIPF7Q8N8F6 280 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 BHLHE23Q8NDY6 225 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 SLC30A7Q8NEW0 376 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 BEST4Q8NFU0 473 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 OR8B12Q8NGG6 310 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 OR1F12Q8NHA8 337 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 OTOSQ8NHW6 89 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 RNF133Q8WVZ7 376 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 CORO2AQ92828 525 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 RPL3LQ92901 407 aaKnown RBP3.05□□□□□ -1.92
COL9A1-206ENST00000470652 TMEM203Q969S6 136 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 DTNBP1Q96EV8 351 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 ZFP3Q96NJ6 502 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 OPALINQ96PE5 141 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 OR8B4Q96RC9 309 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 CITED2Q99967 270 aaPredicted RBP3.05□□□□□ -1.92
COL9A1-206ENST00000470652 COPS4Q9BT78 406 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 MED18Q9BUE0 208 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 VCX3BQ9H321 246 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 DUSP21Q9H596 190 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 SIAEQ9HAT2 523 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 FGF20Q9NP95 211 aaPredicted RBP3.05□□□□□ -1.92
COL9A1-206ENST00000470652 CCNB1IP1Q9NPC3 277 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 GLRX2Q9NS18 164 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 DDX28Q9NUL7 540 aaKnown RBP3.05□□□□□ -1.92
COL9A1-206ENST00000470652 FAM206AQ9NX38 181 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 DCAF16Q9NXF7 216 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 TREM2Q9NZC2 230 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 WARS2Q9UGM6 360 aaKnown RBP3.05□□□□□ -1.92
COL9A1-206ENST00000470652 LAMP5Q9UJQ1 280 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 VSIG4Q9Y279 399 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 STARD10Q9Y365 291 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 DYSFO75923 2080 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 PDZD2O15018 2839 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 BAHCC1Q9P281 2608 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 SPG11Q96JI7 2443 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ABCA2Q9BZC7 2435 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 MAP1AP78559 2803 aaPredicted RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TANC2Q9HCD6 1990 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF469Q96JG9 3925 aaPredicted RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ARPC4-TTLL3A0A0A6YYG9 625 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 A0A1B0GTI1 187 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TRIM64A6NGJ6 449 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TUBAL3A6NHL2 446 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 OR6C65A6NJZ3 312 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 OR4C45A6NMZ5 311 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF670-ZNF695F2Z2N8 137 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 LYNX1G3V0Z9 82 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 M0R135 149 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 CCSO14618 274 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 PIN1P1O15428 100 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 SMPD2O60906 423 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 UBL3O95164 117 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 RAB36O95755 333 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TTRP02766 147 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 HLA-DPB1P04440 258 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms