RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 LPAR5Q9H1C0 372 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 HEXA-AS1Q9H8Q6 139 aa22.86■■□□□ 1.25
SMARCC1-203ENST00000454240 NOTOA8MTQ0 251 aa22.85■■□□□ 1.25
SMARCC1-203ENST00000454240 ZNF782Q6ZMW2 699 aaPredicted RBP22.85■■□□□ 1.25
SMARCC1-203ENST00000454240 FAM89BQ8N5H3 189 aa22.85■■□□□ 1.25
SMARCC1-203ENST00000454240 ZNF565Q8N9K5 539 aa22.85■■□□□ 1.25
SMARCC1-203ENST00000454240 NICN1Q9BSH3 213 aa22.85■■□□□ 1.25
SMARCC1-203ENST00000454240 GAL3ST2Q9H3Q3 398 aa22.85■■□□□ 1.25
SMARCC1-203ENST00000454240 PRDM13Q9H4Q3 707 aa22.85■■□□□ 1.25
SMARCC1-203ENST00000454240 A0A0A6YYD4 124 aa22.84■■□□□ 1.25
SMARCC1-203ENST00000454240 SMIM30A4D0T7 59 aa22.84■■□□□ 1.25
SMARCC1-203ENST00000454240 AIREO43918 545 aa22.84■■□□□ 1.25
SMARCC1-203ENST00000454240 ZNF497Q6ZNH5 498 aa22.84■■□□□ 1.25
SMARCC1-203ENST00000454240 SIGLECL1Q8N7X8 197 aa22.84■■□□□ 1.25
SMARCC1-203ENST00000454240 OR13A1Q8NGR1 328 aa22.84■■□□□ 1.25
SMARCC1-203ENST00000454240 NEK7Q8TDX7 302 aa22.84■■□□□ 1.25
SMARCC1-203ENST00000454240 URM1Q9BTM9 101 aaKnown RBP22.84■■□□□ 1.25
SMARCC1-203ENST00000454240 TMEM272A0A1B0GTI8 110 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 TMEM30CPA0ZSE6 113 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 ZNF729A6NN14 1252 aaPredicted RBP22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 NPFFO15130 113 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 MMP23AO75900 390 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 CLPXO76031 633 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 CHATP28329 748 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 HILS1P60008 231 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 C17orf58Q2M2W7 97 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 DEFB112Q30KQ8 113 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 HEPN1Q6WQI6 88 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 GAPTQ8N292 157 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 PNKDQ8N490 385 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 LIN7BQ9HAP6 207 aa22.83■■□□□ 1.25
SMARCC1-203ENST00000454240 VENTXO95231 258 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 MT-ND4P03905 459 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 CLEC2LP0C7M8 214 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 SLC2A2P11168 524 aaPredicted RBP22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 CYYR1Q96J86 154 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 NEDD4LQ96PU5 975 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 FUNDC2Q9BWH2 189 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 ETAA1Q9NY74 926 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 RAB22AQ9UL26 194 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 SESN1Q9Y6P5 492 aa22.82■■□□□ 1.24
SMARCC1-203ENST00000454240 A0A0U1RQK1 487 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 KBTBD11-OT1A0A1B0GTJ5 212 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 MDFIC2A0A1B0GVS7 189 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 A0A1W2PRD5 423 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 A0A1W2PRF3 423 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 A0A1W2PRM7 423 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 CA11O75493 328 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 GLP1RP43220 463 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 MXD1Q05195 221 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 PLA2G7Q13093 441 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 OR13D1Q8NGV5 346 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 LINC00574Q9H8X3 128 aa22.81■■□□□ 1.24
SMARCC1-203ENST00000454240 A0A0B4J203 849 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 UBE2QL1A1L167 161 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 FOXI3A8MTJ6 420 aaPredicted RBP22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 SOCS1O15524 211 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 TFAP2AP05549 437 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 COX7A1P24310 79 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 CDK2P24941 298 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 BLVRBP30043 206 aaPredicted RBP22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 TGFBR1P36897 503 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 MIDNQ504T8 468 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 NKAPLQ5M9Q1 402 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 SFXN4Q6P4A7 337 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 RBMS3Q6XE24 437 aaKnown RBP22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 MRGPRDQ8TDS7 321 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 DYRK2Q92630 601 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 JMJD8Q96S16 334 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 TMEM133Q9H2Q1 129 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 ESM1Q9NQ30 184 aa22.8■■□□□ 1.24
SMARCC1-203ENST00000454240 TRAV39A0A0B4J263 110 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 RAB6AP20340 208 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 GZMHP20718 246 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 OMGP23515 440 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 SAA4P35542 130 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 GDNFP39905 211 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 ALDH3B2P48448 385 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 SRSF2Q01130 221 aaKnown RBP22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 PRAMEF5Q5TYX0 476 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 C6orf201Q7Z4U5 140 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 OR11H6Q8NGC7 330 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 PTX4Q96A99 478 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 SULT4A1Q9BR01 284 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 FAAP24Q9BTP7 215 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 CALYQ9NYX4 217 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 DAPK2Q9UIK4 370 aa22.79■■□□□ 1.24
SMARCC1-203ENST00000454240 MEIOCA2RUB1 952 aa22.78■■□□□ 1.24
SMARCC1-203ENST00000454240 NPIPB11E5RHQ5 1161 aa22.78■■□□□ 1.24
SMARCC1-203ENST00000454240 EFNB2P52799 333 aa22.78■■□□□ 1.24
SMARCC1-203ENST00000454240 TMEM50BP56557 158 aa22.78■■□□□ 1.24
SMARCC1-203ENST00000454240 LSM3P62310 102 aaKnown RBP22.78■■□□□ 1.24
SMARCC1-203ENST00000454240 OR52W1Q6IF63 320 aa22.78■■□□□ 1.24
SMARCC1-203ENST00000454240 ZDHHC22Q8N966 263 aa22.78■■□□□ 1.24
SMARCC1-203ENST00000454240 HSF4Q9ULV5 492 aa22.78■■□□□ 1.24
SMARCC1-203ENST00000454240 IL1AP01583 271 aa22.77■■□□□ 1.24
SMARCC1-203ENST00000454240 VEGFCP49767 419 aa22.77■■□□□ 1.24
SMARCC1-203ENST00000454240 BAIAP2L2Q6UXY1 529 aa22.77■■□□□ 1.24
SMARCC1-203ENST00000454240 Q6YL49 198 aa22.77■■□□□ 1.24
SMARCC1-203ENST00000454240 CCDC107Q8WV48 283 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms