RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 GRIN2BQ13224 1484 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 IGHV3-73A0A0B4J1V6 119 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 IGHV2OR16-5A0A0B4J2B6 119 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 IGKV1-12A0A0C4DH73 117 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 TRBV11-1A0A0K0K1C0 115 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 TMEM235A6NFC5 223 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 OR2AT4A6NND4 320 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 C9J4A7 227 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 UPK2O00526 184 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 NDC80O14777 642 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 BCKDKO14874 412 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 RNF113AO15541 343 aaKnown RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 ALOX12BO75342 701 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 MPDU1O75352 247 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 B3GALNT1O75752 331 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 CIAO1O76071 339 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 SNAI1O95863 264 aaPredicted RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 IGKV1D-12P01611 117 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 CATP04040 527 aaKnown RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 IFNW1P05000 195 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 SLC2A3P11169 496 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 SLC25A16P16260 332 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 IFNAR2P48551 515 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 RAB25P57735 213 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 RPL23AP62750 156 aaKnown RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 PAFAH1B2P68402 229 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 DEFA6Q01524 100 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 C2orf80Q0P641 193 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 GABRA6Q16445 453 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 MOGQ16653 247 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 GOLGA7BQ2TAP0 167 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 LGALS9BQ3B8N2 356 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 MAJINQ3KP22 176 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 HSDL1Q3SXM5 330 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 CDNFQ49AH0 187 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 LRRC23Q53EV4 343 aaPredicted RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 PABPC1L2AQ5JQF8 200 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 C7orf65Q6ZTY9 151 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 SSX7Q7RTT5 188 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 LHFPL1Q86WI0 220 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 C1orf158Q8N1D5 194 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 KIF2BQ8N4N8 673 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 NECAB1Q8N987 351 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 ANGPTL6Q8NI99 470 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 PATE1Q8WXA2 126 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 ELMO1Q92556 727 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 JSRP1Q96MG2 331 aaPredicted RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 NAP1L5Q96NT1 182 aaPredicted RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 QKIQ96PU8 341 aaKnown RBP eCLIP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 TGS1Q96RS0 853 aaKnown RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 LINC01587Q99440 93 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 UPK3BQ9BT76 320 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 MND1Q9BWT6 205 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 ALX4Q9H161 411 aaPredicted RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 OR51B5Q9H339 312 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 WDR55Q9H6Y2 383 aaPredicted RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 LRRC40Q9H9A6 602 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 ADA2Q9NZK5 511 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 RBM12B-AS1Q9P1G2 102 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 SLC22A14Q9Y267 594 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 EIF4G1Q04637 1599 aaKnown RBP-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 NAV1Q8NEY1 1877 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 ARAP3Q8WWN8 1544 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 FLNCQ14315 2725 aa-0.29□□□□□ -2.46
SNORD28-201ENST00000384706 ATRNO75882 1429 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 WDR90Q96KV7 1748 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 WNK2Q9Y3S1 2297 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 CELSR1Q9NYQ6 3014 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 IGHV3OR15-7A0A075B7D8 119 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 A0A0D9SG42 100 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 KBTBD11-OT1A0A1B0GTJ5 212 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 MDFIC2A0A1B0GVS7 189 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 TRAPPC13A5PLN9 417 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 PGPA6NDG6 321 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 HMSDA8MTL9 139 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 HACD1B0YJ81 288 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 H3BP45 60 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 K7EQS6 105 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 M0QXV9 152 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 COCHO43405 550 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 XRCC2O43543 280 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 DENRO43583 198 aaKnown RBP-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 DNAJB6O75190 326 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 FCN3O75636 299 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 HLA-HP01893 362 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 FTH1P02794 183 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 BPGMP07738 259 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 ZNF728P0DKX0 622 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 GFAPP14136 432 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 M6PRP20645 277 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 CD9P21926 228 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 CD86P42081 329 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 AKR1C2P52895 323 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 AQP4P55087 323 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 BSPH1Q075Z2 132 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 IFFO1Q0D2I5 559 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 CDK10Q15131 360 aa-0.3□□□□□ -2.46
SNORD28-201ENST00000384706 ELOBQ15370 118 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms