RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 SIGLEC5O15389 551 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 CA11O75493 328 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 CSTBP04080 98 aaKnown RBP17.41■□□□□ 0.38
SYNC-201ENST00000373484 ZNF93P35789 620 aaPredicted RBP17.41■□□□□ 0.38
SYNC-201ENST00000373484 GNALP38405 381 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 ECI1P42126 302 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 ARL6IP1Q15041 203 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 C11orf71Q6IPW1 123 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 LHFPL1Q86WI0 220 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 ZNF101Q8IZC7 436 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 OR10S1Q8NGN2 331 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 CMBLQ96DG6 245 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 SLAMF6Q96DU3 332 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 ADAT3Q96EY9 351 aaPredicted RBP17.41■□□□□ 0.38
SYNC-201ENST00000373484 RRNAD1Q96FB5 475 aaKnown RBP17.41■□□□□ 0.38
SYNC-201ENST00000373484 NKX3-1Q99801 234 aaPredicted RBP17.41■□□□□ 0.38
SYNC-201ENST00000373484 BCL2L14Q9BZR8 327 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 GHRLQ9UBU3 117 aa17.41■□□□□ 0.38
SYNC-201ENST00000373484 FBXO9Q9UK97 447 aaPredicted RBP17.41■□□□□ 0.38
SYNC-201ENST00000373484 SMPD2O60906 423 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 OR4A8P0C604 315 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 GNB3P16520 340 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 TAS2R46P59540 309 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 ANGPTL5Q86XS5 388 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 OR56B1Q8NGI3 324 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 TMED6Q8WW62 240 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 RAB3CQ96E17 227 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 OR51B6Q9H340 312 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 C5orf66Q9H5L9 145 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 TREM1Q9NP99 234 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 ZNF705EA8MWA4 302 aaPredicted RBP17.4■□□□□ 0.38
SYNC-201ENST00000373484 VSTM5A8MXK1 200 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 OVOL3O00110 214 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 LMX1BO60663 402 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 PMP2P02689 132 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 GAPDHP04406 335 aaKnown RBP17.4■□□□□ 0.38
SYNC-201ENST00000373484 DBHP09172 617 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 ECH1Q13011 328 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 EFNB3Q15768 340 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 MSMPQ1L6U9 139 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 RSPO1Q2MKA7 263 aaPredicted RBP17.4■□□□□ 0.38
SYNC-201ENST00000373484 DEFB113Q30KQ7 82 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 KRTAP27-1Q3LI81 207 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 TMEM88Q6PEY1 159 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 TMEM230Q96A57 120 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 C12orf57Q99622 126 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 EGLN1Q9GZT9 426 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 SLC5A7Q9GZV3 580 aa17.4■□□□□ 0.38
SYNC-201ENST00000373484 BEX4Q9NWD9 120 aaPredicted RBP17.4■□□□□ 0.38
SYNC-201ENST00000373484 MYEF2Q9P2K5 600 aaKnown RBP17.4■□□□□ 0.38
SYNC-201ENST00000373484 ARID1AO14497 2285 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 CD5P06127 495 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 ZNF20P17024 532 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 CCL1P22362 96 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 SWI5Q1ZZU3 235 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 POC1AQ8NBT0 407 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 MRPL24Q96A35 216 aaKnown RBP17.39■□□□□ 0.37
SYNC-201ENST00000373484 URM1Q9BTM9 101 aaKnown RBP17.39■□□□□ 0.37
SYNC-201ENST00000373484 RHOFQ9HBH0 211 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 PARP11Q9NR21 331 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 CENPMQ9NSP4 180 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 CCDC168Q8NDH2 2452 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 USF3Q68DE3 2245 aa17.39■□□□□ 0.37
SYNC-201ENST00000373484 MFNGO00587 321 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 ALDH3B1P43353 468 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 SULT1A2P50226 295 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 ERVS71-1P61550 626 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 CBLN2Q8IUK8 224 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 C1orf174Q8IYL3 243 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 FAM89BQ8N5H3 189 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 COMMD1Q8N668 190 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 OR1J1Q8NGS3 322 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 OR5H2Q8NGV7 314 aa17.38■□□□□ 0.37
SYNC-201ENST00000373484 EMG1Q92979 244 aaKnown RBP17.38■□□□□ 0.37
SYNC-201ENST00000373484 C1orf147Q96MC9 270 aaPredicted RBP17.38■□□□□ 0.37
SYNC-201ENST00000373484 MRPS28Q9Y2Q9 187 aaKnown RBP17.38■□□□□ 0.37
SYNC-201ENST00000373484 B9A039 149 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 NGFP01138 241 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 MEOX2P50222 304 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 SLC22A6Q4U2R8 563 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 MRPL37Q9BZE1 423 aaKnown RBP17.37■□□□□ 0.37
SYNC-201ENST00000373484 PLK3Q9H4B4 646 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 SMCO4Q9NRQ5 59 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 MAST4O15021 2626 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 MYO9AB2RTY4 2548 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 ZNF878C9JN71 531 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 CDC14BO60729 498 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 PAX1P15863 534 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 PDZK1IP1Q13113 114 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 RNF212Q495C1 297 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 C15orf54Q8N8G6 183 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 MICU1Q9BPX6 476 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 TMEM59Q9BXS4 323 aa17.37■□□□□ 0.37
SYNC-201ENST00000373484 ZNF701Q9NV72 531 aaPredicted RBP17.37■□□□□ 0.37
SYNC-201ENST00000373484 CHD3Q12873 2000 aaKnown RBP17.37■□□□□ 0.37
SYNC-201ENST00000373484 PRRC2AP48634 2157 aaKnown RBP17.36■□□□□ 0.37
SYNC-201ENST00000373484 RNASEK-C17orf49H0YIS7 233 aa17.36■□□□□ 0.37
SYNC-201ENST00000373484 CST4P01036 141 aa17.36■□□□□ 0.37
SYNC-201ENST00000373484 OTX1P32242 354 aaPredicted RBP17.36■□□□□ 0.37
SYNC-201ENST00000373484 CDKN1AP38936 164 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms