RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 NUP50Q9UKX7 468 aa11.41□□□□□ -0.58
RNF40-212ENST00000602784 UBE2J1Q9Y385 318 aaPredicted RBP11.41□□□□□ -0.58
RNF40-212ENST00000602784 ANK3Q12955 4377 aaKnown RBP11.41□□□□□ -0.58
RNF40-212ENST00000602784 LDLRAD4O15165 306 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 TMEM127O75204 238 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 ZNF728P0DKX0 622 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 HOXB4P17483 251 aaPredicted RBP11.4□□□□□ -0.58
RNF40-212ENST00000602784 PRTN3P24158 256 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 DLX6P56179 175 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 AESQ08117 197 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 RBM39Q14498 530 aaKnown RBP11.4□□□□□ -0.58
RNF40-212ENST00000602784 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.58
RNF40-212ENST00000602784 KRBOX4Q5JUW0 171 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 OR10K2Q6IF99 312 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 FAM89BQ8N5H3 189 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 C11orf42Q8N5U0 333 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 COQ2Q96H96 371 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 PCGF1Q9BSM1 259 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.58
RNF40-212ENST00000602784 FUNDC2Q9BWH2 189 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 ZNF581Q9P0T4 197 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 SVEP1Q4LDE5 3571 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 DSCAML1Q8TD84 2053 aa11.4□□□□□ -0.58
RNF40-212ENST00000602784 ZFHX3Q15911 3703 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 C2CD3Q4AC94 2353 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 TRGV10A0A0A0MS01 117 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 ODAMA1E959 279 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 C17orf98A8MV24 154 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 MCRIP1C9JLW8 97 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 PDCD6O75340 191 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 CA11O75493 328 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 GLIPR1P48060 266 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 CLDN12P56749 244 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 RIPPLY3P57055 190 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 ZNF273Q14593 569 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 ATXN7L3Q14CW9 347 aaPredicted RBP11.39□□□□□ -0.59
RNF40-212ENST00000602784 FAM189A2Q15884 450 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 ATAD3CQ5T2N8 411 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 HES5Q5TA89 166 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 GPR157Q5UAW9 335 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 NCR3LG1Q68D85 454 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 SIGIRRQ6IA17 410 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 SLC35E4Q6ICL7 350 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 RAB12Q6IQ22 244 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 C9orf139Q6ZV77 190 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 TCF23Q7RTU1 214 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 VMO1Q7Z5L0 202 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 ANKRD13BQ86YJ7 626 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 BPIFB2Q8N4F0 458 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 TNFRSF14Q92956 283 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 PTX4Q96A99 478 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 RNF167Q9H6Y7 350 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 LIN7BQ9HAP6 207 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 TAS2R3Q9NYW6 316 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 OR6C3Q9NZP0 311 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 RAB22AQ9UL26 194 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 PEX16Q9Y5Y5 336 aa11.39□□□□□ -0.59
RNF40-212ENST00000602784 HSPB6O14558 160 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 RAB6AP20340 208 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 EPHA1P21709 976 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 FPR2P25090 351 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 SCAND1P57086 179 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 TUSC1Q2TAM9 212 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 RSBN1Q5VWQ0 802 aaPredicted RBP11.38□□□□□ -0.59
RNF40-212ENST00000602784 SFXN4Q6P4A7 337 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 GPR141Q7Z602 305 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 CROCCP3Q8IVE0 287 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 TPRX1Q8N7U7 411 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 ZNF565Q8N9K5 539 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 ZNF714Q96N38 554 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 NEDD4LQ96PU5 975 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 LPAR5Q9H1C0 372 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 KIF25Q9UIL4 384 aa11.38□□□□□ -0.59
RNF40-212ENST00000602784 MEIKINA0A087WXM9 373 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 CENPVL3A0A0U1RRI6 287 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 TMEM272A0A1B0GTI8 110 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 TMEM30CPA0ZSE6 113 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 IFNA2P01563 188 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 IL1AP01583 271 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 IGHV4-38-2P0DP08 117 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 CCL3L1P16619 93 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 CHATP28329 748 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 RPL5P46777 297 aaKnown RBP11.37□□□□□ -0.59
RNF40-212ENST00000602784 ERVFRD-1P60508 538 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 MXD1Q05195 221 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 ZNF497Q6ZNH5 498 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 SLC16A12Q6ZSM3 486 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 TRAPPC6BQ86SZ2 158 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 GAPTQ8N292 157 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 PLPPR1Q8TBJ4 325 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 NEK7Q8TDX7 302 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 LHX4Q969G2 390 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 GAL3ST2Q9H3Q3 398 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 KCNK15Q9H427 330 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 HEXA-AS1Q9H8Q6 139 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 LINC00574Q9H8X3 128 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 HSF4Q9ULV5 492 aa11.37□□□□□ -0.59
RNF40-212ENST00000602784 A0A0A6YYD4 124 aa11.36□□□□□ -0.59
RNF40-212ENST00000602784 TRAV40A0A0B4J280 105 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms