RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 VEGFCP49767 419 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 DYNC1I2Q13409 638 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 METTL11BQ5VVY1 283 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 MZT2AQ6P582 158 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 TRAPPC6BQ86SZ2 158 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 FGFRL1Q8N441 504 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 BPIFB2Q8N4F0 458 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 KIR3DL3Q8N743 410 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 LY6G5BQ8NDX9 201 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 OR4M1Q8NGD0 313 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 SMR3AQ99954 134 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 NICN1Q9BSH3 213 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 ATG5Q9H1Y0 275 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 C7orf69Q9H7B7 122 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 MMP26Q9NRE1 261 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 PLEKHJ1Q9NW61 149 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 OR6C3Q9NZP0 311 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 RSL24D1Q9UHA3 163 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 SPATA2Q9UM82 520 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 DOCK11Q5JSL3 2073 aa12.06□□□□□ -0.48
SCAMP4-209ENST00000585335 TMEM30CPA0ZSE6 113 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 H3BMQ9 156 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 ZNF701M0R085 212 aaPredicted RBP12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 PAHP00439 452 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 ZNF182P17025 639 aaPredicted RBP12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 CHATP28329 748 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 PAX5Q02548 391 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 PAX2Q02962 417 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 AESQ08117 197 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 SPCS2Q15005 226 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 ARL6IP1Q15041 203 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 SLC35E4Q6ICL7 350 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 FAM89BQ8N5H3 189 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 NCOR1P1Q9H4R4 102 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 C19orf12Q9NSK7 152 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 RHBDL2Q9NX52 303 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 ING3Q9NXR8 418 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 KPTNQ9Y664 436 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 AUP1Q9Y679 476 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 LINC00312Q9Y6C7 94 aa12.05□□□□□ -0.48
SCAMP4-209ENST00000585335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 MEIKINA0A087WXM9 373 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 ODAMA1E959 279 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 M0R1W7 72 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 EFNB2P52799 333 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 MRPS15P82914 257 aaKnown RBP12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 CR1LQ2VPA4 569 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 TMEM200BQ69YZ2 307 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 Q6ZTK2 550 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 OR10R2Q8NGX6 335 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 DACT3Q96B18 629 aaPredicted RBP12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 RAB3CQ96E17 227 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 GAL3ST2Q9H3Q3 398 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 CCDC59Q9P031 241 aaKnown RBP12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 HSF4Q9ULV5 492 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 UBE2J1Q9Y385 318 aaPredicted RBP12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 ABCA1O95477 2261 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 CELSR1Q9NYQ6 3014 aa12.04□□□□□ -0.48
SCAMP4-209ENST00000585335 A0A0A6YYD4 124 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 UBE2QL1A1L167 161 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 SOCS1O15524 211 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 TOX4O94842 621 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 GLIPR1P48060 266 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 ARF6P62330 175 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 PAX8Q06710 450 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 UBE2NLQ5JXB2 153 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 SIGIRRQ6IA17 410 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 BRICD5Q6PL45 260 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 C1orf122Q6ZSJ8 110 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 C6orf201Q7Z4U5 140 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 TPRX1Q8N7U7 411 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 SAMD12Q8N8I0 201 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 ZNF565Q8N9K5 539 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 COQ2Q96H96 371 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 ZNF714Q96N38 554 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 RBM38Q9H0Z9 239 aaKnown RBP12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 GSX1Q9H4S2 264 aaPredicted RBP12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 CHMP1AQ9HD42 196 aaPredicted RBP12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 RAB9BQ9NP90 201 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 DIABLOQ9NR28 239 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 ZNF581Q9P0T4 197 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 COMMD3Q9UBI1 195 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 KIF25Q9UIL4 384 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 MED13LQ71F56 2210 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
SCAMP4-209ENST00000585335 A0A0A6YYH2 397 aa12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 A6NJ64 397 aa12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 RBP4P02753 201 aa12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 ZNF728P0DKX0 622 aa12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 GLP1RP43220 463 aa12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 PLA2G7Q13093 441 aa12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 RSBN1Q5VWQ0 802 aaPredicted RBP12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 TRAT1Q6PIZ9 186 aa12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 METAP1DQ6UB28 335 aaPredicted RBP12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 ZNF497Q6ZNH5 498 aa12.02□□□□□ -0.49
SCAMP4-209ENST00000585335 OR5H6Q8NGV6 325 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms