RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DPCDQ9BVM2 203 aaPredicted RBP11□□□□□ -0.65
CDH1-204ENST00000562118 LPAR5Q9H1C0 372 aa11□□□□□ -0.65
CDH1-204ENST00000562118 PPA2Q9H2U2 334 aa11□□□□□ -0.65
CDH1-204ENST00000562118 RNF167Q9H6Y7 350 aa11□□□□□ -0.65
CDH1-204ENST00000562118 NUP50Q9UKX7 468 aa11□□□□□ -0.65
CDH1-204ENST00000562118 FBN1P35555 2871 aaKnown RBP10.99□□□□□ -0.65
CDH1-204ENST00000562118 KIAA2026Q5HYC2 2103 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 ATRQ13535 2644 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 CENPVL3A0A0U1RRI6 287 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 A0A1W2PPH5 198 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 hADV38S2A0JD32 116 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 ODAMA1E959 279 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 H3BUI4 141 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 CRTAPO75718 401 aaPredicted RBP10.99□□□□□ -0.65
CDH1-204ENST00000562118 OR7C1O76099 320 aaPredicted RBP10.99□□□□□ -0.65
CDH1-204ENST00000562118 GABARAPO95166 117 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 ZNF728P0DKX0 622 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 ARSBP15848 533 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 CHATP28329 748 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 SCAND1P57086 179 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 TAF9Q16594 264 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 ZNF497Q6ZNH5 498 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 USP43Q70EL4 1123 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 PRIMA1Q86XR5 153 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 OR4M1Q8NGD0 313 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 OR51D1Q8NGF3 324 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 PLPPR1Q8TBJ4 325 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 FAM3DQ96BQ1 224 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 FUNDC2Q9BWH2 189 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 TMEM59Q9BXS4 323 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 KCNK15Q9H427 330 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 BANF2Q9H503 90 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 TAS2R3Q9NYW6 316 aa10.99□□□□□ -0.65
CDH1-204ENST00000562118 TRAV40A0A0B4J280 105 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 TMEM272A0A1B0GTI8 110 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 A0A1W2PQ09 198 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 FUOMA2VDF0 154 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 RNASEK-C17orf49H0YIS7 233 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 PDCD6O75340 191 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 CA11O75493 328 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 CCL3L1P16619 93 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 RAB6AP20340 208 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 EPHA1P21709 976 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 SDC2P34741 201 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 GLIPR1P48060 266 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 AESQ08117 197 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 SCGB2A2Q13296 93 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 ATXN7L3Q14CW9 347 aaPredicted RBP10.98□□□□□ -0.65
CDH1-204ENST00000562118 C2orf76Q3KRA6 126 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 PAN3Q58A45 887 aaKnown RBP10.98□□□□□ -0.65
CDH1-204ENST00000562118 NCR3LG1Q68D85 454 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 OR10K2Q6IF99 312 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 SFXN4Q6P4A7 337 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 ANKRD13BQ86YJ7 626 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 FAM185AQ8N0U4 392 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 TPRX1Q8N7U7 411 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 SELENOIQ9C0D9 397 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 PLGRKTQ9HBL7 147 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 ONECUT1Q9UBC0 465 aa10.98□□□□□ -0.65
CDH1-204ENST00000562118 A0A087X0M5 115 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 A0A1B0GX30 115 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 NPIPB11E5RHQ5 1161 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 AIREO43918 545 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 MPIG6BO95866 241 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 IGHV1-69P01742 117 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 FUT3P21217 361 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 UBE2E1P51965 193 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 CLDN12P56749 244 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 EDDM3BP56851 147 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 PLA2G7Q13093 441 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 EDDM3AQ14507 147 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 P2RY14Q15391 338 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 CTF1Q16619 201 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 C17orf58Q2M2W7 97 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 KRBOX4Q5JUW0 171 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 HEPN1Q6WQI6 88 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 FAM46BQ96A09 425 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 AJUBAQ96IF1 538 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 ZNF714Q96N38 554 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 NICN1Q9BSH3 213 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 PCGF1Q9BSM1 259 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 LIN7BQ9HAP6 207 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 OR6C3Q9NZP0 311 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 ZNF69Q9UC07 566 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 HSF4Q9ULV5 492 aa10.97□□□□□ -0.65
CDH1-204ENST00000562118 A0A0A6YYJ9 748 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 LOC100506127A0A0U1RQW1 187 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 ZNF729A6NN14 1252 aaPredicted RBP10.96□□□□□ -0.65
CDH1-204ENST00000562118 ODF3BA8MYP8 253 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 CLPXO76031 633 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 IL1AP01583 271 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 IGHV1-8P0DP01 117 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 CD34P28906 385 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 SRP14P37108 136 aaKnown RBP10.96□□□□□ -0.65
CDH1-204ENST00000562118 TMEM50BP56557 158 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 ERVFRD-1P60508 538 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 GUCA2AQ02747 115 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 SCN1BQ07699 218 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 BLMHQ13867 455 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms