RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 UNC79Q9P2D8 2635 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 CNTRLQ7Z7A1 2325 aa2.39□□□□□ -2.03
SCFD1-207ENST00000544052 IGHV5-51A0A0C4DH38 117 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 C1orf232A0A0U1RR37 186 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 RAB19A4D1S5 217 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 SMLR1H3BR10 107 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 FARS2O95363 451 aaKnown RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 HLA-DPB1P04440 258 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 TPM3P06753 285 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 PGA4P0DJD7 388 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 PGA3P0DJD8 388 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 KDELR1P24390 212 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF121P58317 390 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 RPS23P62266 143 aaKnown RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 PRR3P79522 188 aaKnown RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 ERCC8Q13216 396 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 PIGHQ14442 188 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 THEM4Q5T1C6 240 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF565Q8N9K5 539 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 CYB561A3Q8NBI2 242 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 SRSF12Q8WXF0 261 aaKnown RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 TMEM159Q96B96 161 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 TM4SF18Q96CE8 201 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 TRNT1Q96Q11 434 aaKnown RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 IFI27L2Q9H2X8 130 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 SAV1Q9H4B6 383 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 WFDC1Q9HC57 220 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 MCUBQ9NWR8 336 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 STMN3Q9NZ72 180 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 SCN3AQ9NY46 2000 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 NCOA6Q14686 2063 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 CRYBG3Q68DQ2 2970 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 DOPEY1Q5JWR5 2465 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 CACNA1CQ13936 2221 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 POLEQ07864 2286 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 PCNX1Q96RV3 2341 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 IGHV3-66A0A0C4DH42 116 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 LOC285095A0A1B0GVY8 99 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 A0A1B0GW15 77 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 A0A1W2PQ67 120 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 CCL22O00626 93 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 ERI3O43414 337 aaKnown RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 SCN2BO60939 215 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 HSBP1O75506 76 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 KLHL2O95198 593 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 LCA5LO95447 670 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 ERGP11308 486 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 CCNOP22674 350 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 FABP6P51161 128 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 P2RX1P51575 399 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 RAP1AP62834 184 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 QPRTQ15274 297 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 NOXO1Q8NFA2 376 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 CT55Q8WUE5 264 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 TFGQ92734 400 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 GALNT14Q96FL9 552 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 SLC25A39Q9BZJ4 359 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 FBXO8Q9NRD0 319 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 IFNKQ9P0W0 207 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 FLVCR2Q9UPI3 526 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 AKAP9Q99996 3911 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 RP1L1Q8IWN7 2480 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-207ENST00000544052 FBN2P35556 2912 aa2.38□□□□□ -2.03
SCFD1-207ENST00000544052 PRRC2CQ9Y520 2896 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 hCG_1818297A0A087WSY0 165 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 A0A1B0GVX0 72 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SYCE1LA8MT33 242 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PDZK1P1A8MUH7 402 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 RFXANKO14593 260 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 XRCC2O43543 280 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SNAI2O43623 268 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 MPDU1O75352 247 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CDK14O94921 469 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 S100A6P06703 90 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 RD3LP0DJH9 198 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CD37P11049 281 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF823P16415 610 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF7P17097 686 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CAPZBP47756 277 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 GABRA4P48169 554 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 RPL26P61254 145 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 DYNLT1P63172 113 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 STX3Q13277 289 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PMS2P3Q13401 168 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PDK2Q15119 407 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 DEFB109BQ30KR1 87 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 C18orf21Q32NC0 220 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 TSPO2Q5TGU0 170 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 H3F3CQ6NXT2 135 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF567Q8N184 647 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF786Q8N393 782 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 C15orf56Q8N910 161 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 OR11H7Q8NGC8 314 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 OR6Q1Q8NGQ2 317 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 OR13C4Q8NGS5 318 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 OR5W2Q8NH69 310 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 HAUS1Q96CS2 278 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SEH1LQ96EE3 360 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 OR2A5Q96R48 311 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms