RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SULT1A2P50226 295 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 CLDN18P56856 261 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 PIGPP57054 158 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 TMPRSS7Q7RTY8 843 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 ZNF611Q8N823 705 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 PLA2G2EQ9NZK7 142 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 C14orf166Q9Y224 244 aaKnown RBP12.73□□□□□ -0.37
DDX55-209ENST00000542286 POMT1Q9Y6A1 747 aa12.73□□□□□ -0.37
DDX55-209ENST00000542286 CEACAM18A8MTB9 384 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 CDX4O14627 284 aaPredicted RBP12.72□□□□□ -0.37
DDX55-209ENST00000542286 DIRAS3O95661 229 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 CD59P13987 128 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 FCGR2CP31995 323 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 GPM6AP51674 278 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 GTF3C1Q12789 2109 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 SRSF6Q13247 344 aaKnown RBP12.72□□□□□ -0.37
DDX55-209ENST00000542286 DCAF10Q5QP82 559 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 TMEM251Q8N6I4 163 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 POC1AQ8NBT0 407 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 SPRY4Q9C004 299 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 STRADBQ9C0K7 418 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 DEFB127Q9H1M4 99 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 OPA3Q9H6K4 179 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 PARP11Q9NR21 331 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 MED19A0JLT2 244 aaPredicted RBP12.72□□□□□ -0.37
DDX55-209ENST00000542286 XRCC2O43543 280 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 OR5AC1P0C628 307 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 SP9P0CG40 484 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 EIF5AP63241 154 aaKnown RBP12.72□□□□□ -0.37
DDX55-209ENST00000542286 PLGLB1Q02325 96 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 SPATA46Q5T0L3 261 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 SSX9Q7RTT3 188 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 NUFIP2Q7Z417 695 aaKnown RBP12.72□□□□□ -0.37
DDX55-209ENST00000542286 OSR2Q8N2R0 312 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 CPNE4Q96A23 557 aaPredicted RBP12.72□□□□□ -0.37
DDX55-209ENST00000542286 SPSB1Q96BD6 273 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 C14orf144Q96I85 54 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 ZNF442Q9H7R0 627 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 SPACA1Q9HBV2 294 aa12.72□□□□□ -0.37
DDX55-209ENST00000542286 IFNA2P01563 188 aa12.71□□□□□ -0.37
DDX55-209ENST00000542286 ASCL1P50553 236 aa12.71□□□□□ -0.37
DDX55-209ENST00000542286 CNN3Q15417 329 aaKnown RBP12.71□□□□□ -0.37
DDX55-209ENST00000542286 LYZL2Q7Z4W2 148 aa12.71□□□□□ -0.37
DDX55-209ENST00000542286 MALSU1Q96EH3 234 aa12.71□□□□□ -0.37
DDX55-209ENST00000542286 RAB18Q9NP72 206 aa12.71□□□□□ -0.37
DDX55-209ENST00000542286 BOKQ9UMX3 212 aaPredicted RBP12.71□□□□□ -0.37
DDX55-209ENST00000542286 ATMQ13315 3056 aa12.71□□□□□ -0.37
DDX55-209ENST00000542286 A0A1W2PPE2 198 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 IFITM10A6NMD0 228 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 IFNA17P01571 189 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 IGHEP01854 428 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 LYL1P12980 280 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 HOXA5P20719 270 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 BCL3P20749 454 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 SULT1A1P50225 295 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 HIKESHIQ53FT3 197 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 NSUN5P2Q63ZY6 315 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 Q6ZSR3 168 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 DMRTC2Q8IXT2 367 aaPredicted RBP12.71□□□□□ -0.38
DDX55-209ENST00000542286 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.71□□□□□ -0.38
DDX55-209ENST00000542286 PRSS50Q9UI38 385 aa12.71□□□□□ -0.38
DDX55-209ENST00000542286 ZNF708P17019 499 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 HOXA4Q00056 320 aaPredicted RBP12.7□□□□□ -0.38
DDX55-209ENST00000542286 PMP22Q01453 160 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 CLINT1Q14677 625 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 GGNBP1Q5YKI7 109 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 C2orf50Q96LR7 162 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 STARD10Q9Y365 291 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 KIAA0141Q14154 515 aaPredicted RBP12.7□□□□□ -0.38
DDX55-209ENST00000542286 TMEM42Q69YG0 159 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 ZNF565Q8N9K5 539 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 ZNF552Q9H707 407 aaPredicted RBP12.7□□□□□ -0.38
DDX55-209ENST00000542286 AMDHD2Q9Y303 409 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 AKAP13Q12802 2813 aa12.7□□□□□ -0.38
DDX55-209ENST00000542286 TNFSF15O95150 251 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 NXPH3O95157 252 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 TSPAN15O95858 294 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 S100A2P29034 98 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 MEX3BQ6ZN04 569 aaKnown RBP12.69□□□□□ -0.38
DDX55-209ENST00000542286 FAM173AQ9BQD7 235 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 OTOGLQ3ZCN5 2332 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 DNPH1O43598 174 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 CDX1P47902 265 aaPredicted RBP12.69□□□□□ -0.38
DDX55-209ENST00000542286 KRTAP27-1Q3LI81 207 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 RNFT1Q5M7Z0 435 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 LHFPL2Q6ZUX7 228 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.69□□□□□ -0.38
DDX55-209ENST00000542286 STX12Q86Y82 276 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 SGPP2Q8IWX5 399 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 C17orf78Q8N4C9 275 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 KDF1Q8NAX2 398 aaPredicted RBP12.69□□□□□ -0.38
DDX55-209ENST00000542286 HPSE2Q8WWQ2 592 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 MEGF10Q96KG7 1140 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 SLC7A11Q9UPY5 501 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 ZFHX2Q9C0A1 2572 aaPredicted RBP12.69□□□□□ -0.38
DDX55-209ENST00000542286 CACNA1DQ01668 2161 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 TRAV39A0A0B4J263 110 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 ZNF816-ZNF321PA0A0X1KG74 233 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 TERTO14746 1132 aaKnown RBP12.69□□□□□ -0.38
DDX55-209ENST00000542286 TAAR5O14804 337 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms