RNA–Protein interactions for RNA: ENST00000516381.1

SCARNA17.3-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 125 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.3-201ENST00000516381 RBM22Q9NW64 420 aaKnown RBP eCLIP-1.01□□□□□ -2.57
SCARNA17.3-201ENST00000516381 ZNF257Q9Y2Q1 563 aa-1.01□□□□□ -2.57
SCARNA17.3-201ENST00000516381 FAM215AQ9Y5M1 114 aa-1.01□□□□□ -2.57
SCARNA17.3-201ENST00000516381 PEX16Q9Y5Y5 336 aa-1.01□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SYNRGQ9UMZ2 1314 aa-1.01□□□□□ -2.57
SCARNA17.3-201ENST00000516381 NPHP4O75161 1426 aaPredicted RBP-1.01□□□□□ -2.57
SCARNA17.3-201ENST00000516381 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.01□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TRGV5A0A0B4J1U4 118 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 MEIS3P1A6NDR6 274 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 UPK1AO00322 258 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SLC17A3O00476 420 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 NME4O00746 187 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TOR1AO14656 332 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 ORC5O43913 435 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 COX7A2P2O60397 106 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 FMO6PO60774 539 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TMEM50AO95807 157 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 HPRT1P00492 218 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TGFAP01135 160 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 CCDC192P0DO97 292 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 COL4A5P29400 1685 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 NOS1P29475 1434 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 NUP62P37198 522 aaPredicted RBP-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 MAP2K4P45985 399 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 PPT1P50897 306 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 FABP6P51161 128 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SMARCA4P51532 1647 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 FXYD6P3P58550 94 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 RBM3P98179 157 aaKnown RBP-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 NUCB1Q02818 461 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 PTPRSQ13332 1948 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SCARB2Q14108 478 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 GAMTQ14353 236 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 CLEC12AQ5QGZ9 265 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 CHCHD2P9Q5T1J5 151 aaPredicted RBP-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 IYDQ6PHW0 289 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 Q6ZSR3 168 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 MED13LQ71F56 2210 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 AKNAQ7Z591 1439 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 FAM19A1Q7Z5A9 133 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 LINC00596Q86U02 117 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 MARCH3Q86UD3 253 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 EXOC8Q8IYI6 725 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TMEM156Q8N614 296 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 C10orf53Q8N6V4 93 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 OR11H1Q8NG94 326 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 OR10A6Q8NH74 314 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 ZNF418Q8TF45 676 aaPredicted RBP-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TNFAIP8L1Q8WVP5 186 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 PLAC4Q8WY50 150 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 MYO18AQ92614 2054 aaKnown RBP-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SENP8Q96LD8 212 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 YPEL4Q96NS1 127 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SPACA5Q96QH8 159 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TSNAXQ99598 290 aaKnown RBP-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 ATP5SQ99766 215 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 UPK3BQ9BT76 320 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 STMN4Q9H169 189 aaPredicted RBP-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 DCSTAMPQ9H295 470 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 ASB7Q9H672 318 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 GRPEL1Q9HAV7 217 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 HRASLS2Q9NWW9 162 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 KLK9Q9UKQ9 250 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 MTCH2Q9Y6C9 303 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 DNAH3Q8TD57 4116 aa-1.02□□□□□ -2.57
SCARNA17.3-201ENST00000516381 RYR2Q92736 4967 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 FANCMQ8IYD8 2048 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 DOCK4Q8N1I0 1966 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SCN10AQ9Y5Y9 1956 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 GREB1Q4ZG55 1949 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 WDR19Q8NEZ3 1342 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 IGHV1-45A0A0A0MS14 117 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TRAV14DV4A0A0A6YYC5 116 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TRAV8-6A0A0B4J262 113 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SLC5A10A0PJK1 596 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 PGPA6NDG6 321 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 TMEM212A6NML5 194 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 C9J4A7 227 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 C5orf67F2Z3F1 127 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 LINC01619G3V211 115 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 UBFD1O14562 309 aaKnown RBP-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 ITGB1BP1O14713 200 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SLC9A3R1O14745 358 aaPredicted RBP-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 PHYHO14832 338 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SCAMP2O15127 329 aaKnown RBP-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 ARPC3O15145 178 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 UBDO15205 165 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 INE1O15225 51 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SLC37A4O43826 429 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 MPZL2O60487 215 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 KINO60870 393 aaKnown RBP-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 DNAJB6O75190 326 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 CLDN11O75508 207 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SCGNO76038 276 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 SERPINA3P01011 423 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 BPGMP07738 259 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 RHOCP08134 193 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 CALCBP10092 127 aa-1.03□□□□□ -2.57
SCARNA17.3-201ENST00000516381 GABRG2P18507 467 aa-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms