RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	IGHV2-70D	A0A0C4DH43	119 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788		B4DSR2	109 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	NPIPB11	E5RHQ5	1161 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	C15orf65	H3BRN8	121 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	SIRPB1	O00241	398 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	MGST3	O14880	152 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	SSX5	O60225	188 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	CRTAP	O75718	401 aa	Predicted RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	MMP23A	O75900	390 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	MPIG6B	O95866	241 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	MT-ND4	P03905	459 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	GLA	P06280	429 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	EIF4E	P06730	217 aa	Known RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	MSMB	P08118	114 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	INHBB	P09529	407 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	FOSL1	P15407	271 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	RPS2	P15880	293 aa	Known RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	ELK1	P19419	428 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	GLIPR1	P48060	266 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	PITPNB	P48739	271 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	VEGFC	P49767	419 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	NPY4R	P50391	375 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	CAPZA1	P52907	286 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	SNU13	P55769	128 aa	Known RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	ERVFRD-1	P60508	538 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	AES	Q08117	197 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	ZNF273	Q14593	569 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	CARTPT	Q16568	116 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	C17orf58	Q2M2W7	97 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	ZNF260	Q3ZCT1	412 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	KLF17	Q5JT82	389 aa	Predicted RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	LDLRAD2	Q5SZI1	272 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	IDNK	Q5T6J7	187 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	TMEM200B	Q69YZ2	307 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	BTN2A1	Q7KYR7	527 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	SLC36A1	Q7Z2H8	476 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	PEG10	Q86TG7	708 aa	Known RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	CROCCP3	Q8IVE0	287 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	BPIFB2	Q8N4F0	458 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	TPRX1	Q8N7U7	411 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	MRPL30	Q8TCC3	161 aa	Known RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	CORO2A	Q92828	525 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	MED30	Q96HR3	178 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	ARHGAP5-AS1	Q96IT6	56 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	CMTM3	Q96MX0	182 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	DPCD	Q9BVM2	203 aa	Predicted RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	CHST6	Q9GZX3	395 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	SIRPD	Q9H106	197 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	PPA2	Q9H2U2	334 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	RHBDL2	Q9NX52	303 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	DNAJB11	Q9UBS4	358 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	CLN8	Q9UBY8	286 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR14J1	Q9UGF5	321 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	RAB22A	Q9UL26	194 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	ETV7	Q9Y603	341 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	A3GALT2	U3KPV4	340 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	HIVEP2	P31629	2446 aa		4.06	□□□□□ -1.76
LMNB1-208	ENST00000504788	IGKV1D-8	A0A087WSZ0	117 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	ISPD	A4D126	451 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	C17orf98	A8MV24	154 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	SH2D1B	O14796	132 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	CD5L	O43866	347 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	PDCD6	O75340	191 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR7C1	O76099	320 aa	Predicted RBP	4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	LY6G6D	O95868	133 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	APOA1	P02647	267 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	CSTB	P04080	98 aa	Known RBP	4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	OCM	P0CE72	109 aa	Predicted RBP	4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	PTHLH	P12272	177 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	FUT3	P21217	361 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	GDNF	P39905	211 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	MNDA	P41218	407 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	RORC	P51449	518 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	DVL1P1	P54792	670 aa	Predicted RBP	4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	DLX1	P56177	255 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	P2RX3	P56373	397 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	LCN2	P80188	198 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	IKZF1	Q13422	519 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	KCNJ8	Q15842	424 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	SLC35E4	Q6ICL7	350 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	RAB12	Q6IQ22	244 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	LAX1	Q8IWV1	398 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR8B3	Q8NGG8	313 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR13A1	Q8NGR1	328 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR10R2	Q8NGX6	335 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	RAB40A	Q8WXH6	277 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	RAB39B	Q96DA2	213 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	WDFY2	Q96P53	400 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR8B2	Q96RD0	313 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	TBX15	Q96SF7	602 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAAP24	Q9BTP7	215 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	PECR	Q9BY49	303 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	GSX1	Q9H4S2	264 aa	Predicted RBP	4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	NDUFA13	Q9P0J0	144 aa		4.05	□□□□□ -1.76
LMNB1-208	ENST00000504788	ANAPC10	Q9UM13	185 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms