RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 SASH3O75995 380 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 CYB5AP00167 134 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 IGHV4-30-4P0DP06 118 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 ZNF44P15621 663 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 VDAC1P21796 283 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 GLP1RP43220 463 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 GNG10P50151 68 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 ATP1B3P54709 279 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-236ENST00000498808 BNIP1Q12981 228 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 Q6P435 159 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 HDXQ7Z353 690 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 ZNF491Q8N8L2 437 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 DNAAF1Q8NEP3 725 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 OR13A1Q8NGR1 328 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 KCTD7Q96MP8 289 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 OR5B12Q96R08 314 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 CNN2Q99439 309 aaKnown RBP12.09□□□□□ -0.47
HDAC6-236ENST00000498808 CCDC134Q9H6E4 229 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 C19orf73Q9NVV2 129 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 CALYQ9NYX4 217 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 IDI2-AS1Q9NZ38 188 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 ACTR3BQ9P1U1 418 aa12.09□□□□□ -0.47
HDAC6-236ENST00000498808 A0A1W2PPE3 182 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 RPP14O95059 124 aaKnown RBP12.08□□□□□ -0.48
HDAC6-236ENST00000498808 IL1AP01583 271 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 OSMP13725 252 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 REG1BP48304 166 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 GABPB1Q06547 395 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-236ENST00000498808 SCN1BQ07699 218 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 LTC4SQ16873 150 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 TMEM179BQ7Z7N9 219 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 MOB3BQ86TA1 216 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 CATSPERDQ86XM0 798 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 SLC35F2Q8IXU6 374 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 Q8N1Y9 231 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 DLX4Q92988 240 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-236ENST00000498808 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 LINC00574Q9H8X3 128 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 SLC25A19Q9HC21 320 aa12.08□□□□□ -0.48
HDAC6-236ENST00000498808 SERPINA3P01011 423 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 IGF1P05019 195 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 MYF6P23409 242 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 MTCP1P56278 107 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 ACTR3P61158 418 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 PDZK1IP1Q13113 114 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 LHFPL2Q6ZUX7 228 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 OR6Q1Q8NGQ2 317 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 OR10X1Q8NGY0 326 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 OR2T10Q8NGZ9 312 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 RFT1Q96AA3 541 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 RBMXL1Q96E39 390 aaKnown RBP12.07□□□□□ -0.48
HDAC6-236ENST00000498808 S1PR3Q99500 378 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 KIF25Q9UIL4 384 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 ZNF580Q9UK33 172 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 VSIG4Q9Y279 399 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 TNCP24821 2201 aa12.07□□□□□ -0.48
HDAC6-236ENST00000498808 MAGEA13PA6NCF6 341 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 A8MZ25 164 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 NPIPB11E5RHQ5 1161 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 KDM4BO94953 1096 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 GAPDHP04406 335 aaKnown RBP12.06□□□□□ -0.48
HDAC6-236ENST00000498808 PPIFP30405 207 aaKnown RBP12.06□□□□□ -0.48
HDAC6-236ENST00000498808 SLURP1P55000 103 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 GK3PQ14409 553 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 SSX6Q7RTT6 188 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 BCDIN3DQ7Z5W3 292 aaKnown RBP12.06□□□□□ -0.48
HDAC6-236ENST00000498808 CHST4Q8NCG5 386 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 TMEM104Q8NE00 496 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 OR51T1Q8NGJ9 327 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 RFESDQ8TAC1 157 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 PP6455Q8WZ26 134 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 ADAT3Q96EY9 351 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-236ENST00000498808 RASL11BQ9BPW5 248 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 SPATA25Q9BR10 227 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 ADGRL4Q9HBW9 690 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 TVP23BQ9NYZ1 205 aa12.06□□□□□ -0.48
HDAC6-236ENST00000498808 MEIKINA0A087WXM9 373 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 LOC107986453A0A1B0GWG9 222 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ZNF670-ZNF695F2Z2N8 137 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 OR5H8P0DN80 308 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ATF1P18846 271 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 HTR1FP30939 366 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 SOX6P35712 828 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ZP1P60852 638 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ISL1P61371 349 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 CDK5R1Q15078 307 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 SPATS1Q496A3 300 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ACSM6Q6P461 480 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 DEFB107AQ8IZN7 70 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 HS3ST5Q8IZT8 346 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 YIPF7Q8N8F6 280 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ZNF565Q8N9K5 539 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 CCDC54Q8NEL0 328 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ARPC1AQ92747 370 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ST6GALNAC6Q969X2 333 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 C10orf35Q96D05 121 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 MNTQ99583 582 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 ALX4Q9H161 411 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms