RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TEX38Q6PEX7 206 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 Q8N6K4 173 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 DNAAF1Q8NEP3 725 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 Q8NFD4 153 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 OR4D6Q8NGJ1 314 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 OR8U1Q8NH10 309 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 OR9G1Q8NH87 305 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 CANT1Q8WVQ1 401 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 RFT1Q96AA3 541 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 RPEQ96AT9 228 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 COMMD4Q9H0A8 199 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 PLEKHA1Q9HB21 404 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 EXOSC4Q9NPD3 245 aaKnown RBP10.33□□□□□ -0.76
USF1-206ENST00000491629 PSG11Q9UQ72 335 aa10.33□□□□□ -0.76
USF1-206ENST00000491629 KBTBD11-OT1A0A1B0GTJ5 212 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 A0A1B0GVG6 124 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 LOC107986453A0A1B0GWG9 222 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 ZNF729A6NN14 1252 aaPredicted RBP10.32□□□□□ -0.76
USF1-206ENST00000491629 SH2D1BO14796 132 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 CSN2P05814 226 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 LYL1P12980 280 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 EPHA2P29317 976 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 GPR12P47775 334 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 ATP1B3P54709 279 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 SLC35B1P78383 322 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 ATXN7L3Q14CW9 347 aaPredicted RBP10.32□□□□□ -0.76
USF1-206ENST00000491629 CDK5R1Q15078 307 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 PTGES3Q15185 160 aaKnown RBP10.32□□□□□ -0.76
USF1-206ENST00000491629 PNLIPRP3Q17RR3 467 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 ZNF260Q3ZCT1 412 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 KRBOX4Q5JUW0 171 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 OVCH2Q7RTZ1 564 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 YIPF7Q8N8F6 280 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 OR13A1Q8NGR1 328 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 SPACA5Q96QH8 159 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 TBX5Q99593 518 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 PLSCR3Q9NRY6 295 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 NDE1Q9NXR1 346 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 SMAD5-AS1Q9Y6J3 95 aa10.32□□□□□ -0.76
USF1-206ENST00000491629 FRAS1Q86XX4 4008 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 A0A1W2PPE3 182 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 A0A1W2PQL4 384 aaPredicted RBP10.31□□□□□ -0.76
USF1-206ENST00000491629 B2RBV5 119 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 ZNF670-ZNF695F2Z2N8 137 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 CCRL2O00421 344 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 KDM4BO94953 1096 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 ANXA8P13928 327 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 RASSF2P50749 326 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 DAPP51397 102 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 MTCP1P56278 107 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 ACTR3P61158 418 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 SCN1BQ07699 218 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 FOXE3Q13461 319 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 GPR50Q13585 617 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 KIAA0141Q14154 515 aaPredicted RBP10.31□□□□□ -0.76
USF1-206ENST00000491629 CNPY1Q3B7I2 92 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 ZFAND6Q6FIF0 208 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 FAM53AQ6NSI3 398 aaPredicted RBP10.31□□□□□ -0.76
USF1-206ENST00000491629 Q8N9W7 124 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 EAF1Q96JC9 268 aaPredicted RBP10.31□□□□□ -0.76
USF1-206ENST00000491629 MNTQ99583 582 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 OSBPL10Q9BXB5 764 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 ABCG5Q9H222 651 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 LINC00574Q9H8X3 128 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 ZNF556Q9HAH1 456 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 PCDHB16Q9NRJ7 776 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 GLS2Q9UI32 602 aa10.31□□□□□ -0.76
USF1-206ENST00000491629 IGHV3-72A0A0B4J1Y9 119 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 SMIM31A0A1B0GVY4 71 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 FUOMA2VDF0 154 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 AP4M1O00189 453 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 APOL3O95236 402 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 ZNF44P15621 663 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 ATF1P18846 271 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 ISL1P61371 349 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 CBX3Q13185 183 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 NXNL2Q5VZ03 156 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 ZNF554Q86TJ5 538 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 FOXRED2Q8IWF2 684 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 TCEANCQ8N8B7 351 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 OR51T1Q8NGJ9 327 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 MYOZ3Q8TDC0 251 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 PP6455Q8WZ26 134 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 HSPB9Q9BQS6 159 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 CALYQ9NYX4 217 aa10.3□□□□□ -0.76
USF1-206ENST00000491629 METTL15A6NJ78 407 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 NPIPB11E5RHQ5 1161 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 GNGT2O14610 69 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 MITFO75030 526 aaPredicted RBP10.29□□□□□ -0.76
USF1-206ENST00000491629 SERPINA3P01011 423 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 IGHG4P01861 327 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 KRT8P05787 483 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 ELANEP08246 267 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 HCKP08631 526 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 GLP1RP43220 463 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 GNG10P50151 68 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 RAB7AP51149 207 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 MADCAM1Q13477 382 aa10.29□□□□□ -0.76
USF1-206ENST00000491629 LTC4SQ16873 150 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms