RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 UNQ6126/PRO20091Q6UXV3 157 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 ACOT7LQ6ZUV0 252 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 TMEM200AQ86VY9 491 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 DCUN1D4Q92564 292 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 RIF1Q5UIP0 2472 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 HSPB6O14558 160 aa13.02□□□□□ -0.32
SCAMP4-202ENST00000409472 PDCD6O75340 191 aa13.02□□□□□ -0.32
SCAMP4-202ENST00000409472 AGAP20933 346 aa13.02□□□□□ -0.32
SCAMP4-202ENST00000409472 DUSP1P28562 367 aa13.02□□□□□ -0.32
SCAMP4-202ENST00000409472 MDP1Q86V88 176 aa13.02□□□□□ -0.32
SCAMP4-202ENST00000409472 OR1K1Q8NGR3 316 aa13.02□□□□□ -0.32
SCAMP4-202ENST00000409472 APOBEC3DQ96AK3 386 aaPredicted RBP13.02□□□□□ -0.32
SCAMP4-202ENST00000409472 SYNGR1O43759 233 aa13.02□□□□□ -0.33
SCAMP4-202ENST00000409472 RAB5CP51148 216 aa13.02□□□□□ -0.33
SCAMP4-202ENST00000409472 SOX8P57073 446 aa13.02□□□□□ -0.33
SCAMP4-202ENST00000409472 NMES1Q9C002 83 aa13.02□□□□□ -0.33
SCAMP4-202ENST00000409472 RAB18Q9NP72 206 aa13.02□□□□□ -0.33
SCAMP4-202ENST00000409472 MTCH1Q9NZJ7 389 aa13.02□□□□□ -0.33
SCAMP4-202ENST00000409472 NBEAQ8NFP9 2946 aa13.02□□□□□ -0.33
SCAMP4-202ENST00000409472 PTPRBP23467 1997 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 ZNF732B4DXR9 585 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 RAB32Q13637 225 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 SP6Q3SY56 376 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 GGACTQ9BVM4 153 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 ZNF442Q9H7R0 627 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 METTL8Q9H825 291 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 UQCC1Q9NVA1 299 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 C14orf166Q9Y224 244 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 SVILO95425 2214 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 IGHV2-5P01817 119 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 MT-ND4LP03901 98 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 RD3LP0DJH9 198 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 RCC1P18754 421 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 DTYMKP23919 212 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 NFYBP25208 207 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 FBXW9Q5XUX1 488 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 RTL6Q6ICC9 239 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 IL34Q6ZMJ4 242 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 ZDHHC23Q8IYP9 409 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 POC1AQ8NBT0 407 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 OR11L1Q8NGX0 322 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 BCL2L2Q92843 193 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 WNT2BQ93097 391 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 SSX3Q99909 188 aa13.01□□□□□ -0.33
SCAMP4-202ENST00000409472 CD300LBA8K4G0 201 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 FGF16O43320 207 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 COX5BP10606 129 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 FCGR2CP31995 323 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 PMELP40967 661 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 RBM39Q14498 530 aaKnown RBP13□□□□□ -0.33
SCAMP4-202ENST00000409472 SURF2Q15527 256 aaPredicted RBP13□□□□□ -0.33
SCAMP4-202ENST00000409472 PHLDA2Q53GA4 152 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 FOXRED2Q8IWF2 684 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 C14orf79Q96F83 325 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 LURAP1Q96LR2 239 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 SCGB3A2Q96PL1 93 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 TOLLIPQ9H0E2 274 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 MMP26Q9NRE1 261 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 NECAP2Q9NVZ3 263 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 GSKIPQ9P0R6 139 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 IFNA2P01563 188 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 CTSDP07339 412 aaPredicted RBP13□□□□□ -0.33
SCAMP4-202ENST00000409472 ARR3P36575 388 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 NOVA1P51513 510 aaKnown RBP13□□□□□ -0.33
SCAMP4-202ENST00000409472 PIGPP57054 158 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 ERVS71-1P61550 626 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 MALLQ13021 153 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 CEACAM21Q3KPI0 293 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 LBHQ53QV2 105 aaPredicted RBP13□□□□□ -0.33
SCAMP4-202ENST00000409472 C17orf78Q8N4C9 275 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 TMEM178AQ8NBL3 297 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 MRPL24Q96A35 216 aaKnown RBP13□□□□□ -0.33
SCAMP4-202ENST00000409472 C14orf144Q96I85 54 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 TECTBQ96PL2 329 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 DECR2Q9NUI1 292 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 FAM86C1Q9NVL1 165 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 ATMQ13315 3056 aa13□□□□□ -0.33
SCAMP4-202ENST00000409472 TRBV6-7A0A0A0MS04 114 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 A0A0B4J2A0 478 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 CRYM-AS1A6NIL9 109 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 F5H0A9 414 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 AP4M1O00189 453 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 OR8U8P0C7N1 319 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 FUT3P21217 361 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 OR2T2Q6IF00 324 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 INO80EQ8NBZ0 244 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 EXTL1Q92935 676 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 HIST1H2BAQ96A08 127 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 GFOD1Q9NXC2 390 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 SHPKQ9UHJ6 478 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 IGHV3-64DA0A0J9YX35 117 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 LYZL6O75951 148 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 LY86O95711 162 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 CST4P01036 141 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 S100A10P60903 97 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 PLP2Q04941 152 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 IL15RAQ13261 267 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms