RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 SPARTQ8N0X7 666 aa12.34□□□□□ -0.43
SS18L1-202ENST00000370848 OSR2Q8N2R0 312 aa12.34□□□□□ -0.43
SS18L1-202ENST00000370848 OR5D13Q8NGL4 314 aa12.34□□□□□ -0.43
SS18L1-202ENST00000370848 TBC1D15Q8TC07 691 aa12.34□□□□□ -0.43
SS18L1-202ENST00000370848 C17orf50Q8WW18 174 aa12.34□□□□□ -0.43
SS18L1-202ENST00000370848 TCF7L1Q9HCS4 588 aa12.34□□□□□ -0.43
SS18L1-202ENST00000370848 TNFRSF19Q9NS68 423 aa12.34□□□□□ -0.43
SS18L1-202ENST00000370848 ST3GAL6Q9Y274 331 aa12.34□□□□□ -0.43
SS18L1-202ENST00000370848 C17orf98A8MV24 154 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 GEMIN2O14893 280 aaKnown RBP12.33□□□□□ -0.44
SS18L1-202ENST00000370848 NPFFO15130 113 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 MMP23AO75900 390 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 CSTBP04080 98 aaKnown RBP12.33□□□□□ -0.44
SS18L1-202ENST00000370848 ZNF728P0DKX0 622 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 BMXP51813 675 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 KRTAP10-3P60369 221 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 DEFA6Q01524 100 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 PAN3Q58A45 887 aaKnown RBP12.33□□□□□ -0.44
SS18L1-202ENST00000370848 CHST4Q8NCG5 386 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 LINC01006Q8NI28 216 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 PPP1R35Q8TAP8 253 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 PLPPR1Q8TBJ4 325 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 THRSPQ92748 146 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 S100A13Q99584 98 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 GFI1Q99684 422 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 MMP27Q9H306 513 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 KCNK15Q9H427 330 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 BANF2Q9H503 90 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 C16orf95Q9H693 158 aa12.33□□□□□ -0.44
SS18L1-202ENST00000370848 A0A1W2PPH5 198 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 hADV38S2A0JD32 116 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 TIMM23O14925 209 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 GPR137BO60478 399 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 CRYBA1P05813 215 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 SRMP19623 302 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 PAX6P26367 422 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 SAA4P35542 130 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 UBE2E1P51965 193 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 GUCA2AQ02747 115 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 MEF2CQ06413 473 aaPredicted RBP12.32□□□□□ -0.44
SS18L1-202ENST00000370848 KRBOX4Q5JUW0 171 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 NCR3LG1Q68D85 454 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 BRICD5Q6PL45 260 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 BAIAP2L2Q6UXY1 529 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 SVOPQ8N4V2 548 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 NKAIN3Q8N8D7 197 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 TMEM104Q8NE00 496 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 ZNF714Q96N38 554 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 ZNRD1Q9P1U0 126 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 LINC00312Q9Y6C7 94 aa12.32□□□□□ -0.44
SS18L1-202ENST00000370848 ODAMA1E959 279 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 MEIOCA2RUB1 952 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 M0QZ24 198 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 MRPS14O60783 128 aaKnown RBP12.31□□□□□ -0.44
SS18L1-202ENST00000370848 OR7C1O76099 320 aaPredicted RBP12.31□□□□□ -0.44
SS18L1-202ENST00000370848 IGHV4-59P01825 116 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 PSMB9P28065 219 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 ERP29P30040 261 aaKnown RBP12.31□□□□□ -0.44
SS18L1-202ENST00000370848 GABRA5P31644 462 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 GDNFP39905 211 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
SS18L1-202ENST00000370848 TAF9Q16594 264 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 NHLRC3Q5JS37 347 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 PRAMEF5Q5TYX0 476 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 ZNF773Q6PK81 442 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 GDPGP1Q6ZNW5 385 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 TRAPPC6BQ86SZ2 158 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 CDH26Q8IXH8 852 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 SUMF2Q8NBJ7 301 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 PHYHIPQ92561 330 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 FAM46BQ96A09 425 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 AJUBAQ96IF1 538 aa12.31□□□□□ -0.44
SS18L1-202ENST00000370848 YTHDF1Q9BYJ9 559 aaKnown RBP12.31□□□□□ -0.44
SS18L1-202ENST00000370848 TRAV39A0A0B4J263 110 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 SHISA3A0PJX4 238 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 MEGF11A6BM72 1044 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 ZNF780AO75290 641 aaPredicted RBP12.3□□□□□ -0.44
SS18L1-202ENST00000370848 TSPAN9O75954 239 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 CSN2P05814 226 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 IGHV1-8P0DP01 117 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 GTF2F2P13984 249 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 CALRP27797 417 aaKnown RBP12.3□□□□□ -0.44
SS18L1-202ENST00000370848 TRAM1Q15629 374 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 UTF1Q5T230 341 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 RSBN1Q5VWQ0 802 aaPredicted RBP12.3□□□□□ -0.44
SS18L1-202ENST00000370848 OR10K2Q6IF99 312 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 UQCC2Q9BRT2 126 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 DPCDQ9BVM2 203 aaPredicted RBP12.3□□□□□ -0.44
SS18L1-202ENST00000370848 DPAGT1Q9H3H5 408 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 NDUFB11Q9NX14 153 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 KIF25Q9UIL4 384 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 AK6Q9Y3D8 172 aaKnown RBP12.3□□□□□ -0.44
SS18L1-202ENST00000370848 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 LRRC42Q9Y546 428 aa12.3□□□□□ -0.44
SS18L1-202ENST00000370848 FAM172BPA6NC97 362 aa12.29□□□□□ -0.44
SS18L1-202ENST00000370848 CRTAPO75718 401 aaPredicted RBP12.29□□□□□ -0.44
SS18L1-202ENST00000370848 MGMTP16455 207 aa12.29□□□□□ -0.44
SS18L1-202ENST00000370848 PSMA1P25786 263 aaKnown RBP12.29□□□□□ -0.44
SS18L1-202ENST00000370848 GLP1RP43220 463 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms