RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 MYL9P24844 172 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 OR3A1P47881 315 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 CAV3P56539 151 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 EDDM3BP56851 147 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 ERVFRD-1P60508 538 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 LSM3P62310 102 aaKnown RBP6.48□□□□□ -1.37
CDC42-201ENST00000315554 ATXN7L3Q14CW9 347 aaPredicted RBP6.48□□□□□ -1.37
CDC42-201ENST00000315554 ZNF146Q15072 292 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 GRK1Q15835 563 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 TAF9Q16594 264 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 CHRFAM7AQ494W8 412 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 AARDQ4LEZ3 155 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 SPIN3Q5JUX0 258 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 CD276Q5ZPR3 534 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 ELP2Q6IA86 826 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 Q6P435 159 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 PDZD9Q8IXQ8 264 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 OSR2Q8N2R0 312 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 BPIFB2Q8N4F0 458 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 PCGF1Q9BSM1 259 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 MRI1Q9BV20 369 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 PLGRKTQ9HBL7 147 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 GLS2Q9UI32 602 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 SSR3Q9UNL2 185 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 PRELID1Q9Y255 219 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 ST3GAL6Q9Y274 331 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 POLR3KQ9Y2Y1 108 aaPredicted RBP6.48□□□□□ -1.37
CDC42-201ENST00000315554 SOX21Q9Y651 276 aaPredicted RBP6.48□□□□□ -1.37
CDC42-201ENST00000315554 AUP1Q9Y679 476 aa6.48□□□□□ -1.37
CDC42-201ENST00000315554 SETD2Q9BYW2 2564 aaPredicted RBP6.48□□□□□ -1.37
CDC42-201ENST00000315554 TRAV24A0A0B4J272 114 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 A0A0G2JK05 382 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 J3QLI3 93 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SLC33A1O00400 549 aaPredicted RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 OR7C1O76099 320 aaPredicted RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 MPIG6BO95866 241 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 IGHV4-38-2P0DP08 117 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SLC2A2P11168 524 aaPredicted RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 MGMTP16455 207 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 CCL3L1P16619 93 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 JUNBP17275 347 aaPredicted RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 HNF1AP20823 631 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 CPT2P23786 658 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 HTR2CP28335 458 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 RBM11P57052 281 aaKnown RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 RPL31P62899 125 aaKnown RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 HTD2P86397 168 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 MXD1Q05195 221 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 PAX8Q06710 450 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 PLA2G7Q13093 441 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 ZNF273Q14593 569 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 RAB11BQ15907 218 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 PAN3Q58A45 887 aaKnown RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 C1orf100Q5SVJ3 147 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 ATAD3CQ5T2N8 411 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 GDPD3Q7L5L3 318 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 NR2C2APQ86WQ0 139 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 ZBTB34Q8NCN2 500 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 TBC1D15Q8TC07 691 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 C22orf15Q8WYQ4 148 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SLC25A28Q96A46 364 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 YIPF6Q96EC8 236 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SNX22Q96L94 193 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SELENOIQ9C0D9 397 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SIRT7Q9NRC8 400 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 IL36GQ9NZH8 169 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 V9GY05 133 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 WNK2Q9Y3S1 2297 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 TRAV1-2A0A0B4J238 106 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 TRAV39A0A0B4J263 110 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 TRAV40A0A0B4J280 105 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 A0A1W2PRD5 423 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 A0A1W2PRF3 423 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 A0A1W2PRM7 423 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SLC17A2O00624 439 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 PDCD5O14737 125 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SLC22A1O15245 554 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 AIREO43918 545 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 TOX4O94842 621 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 ECDO95905 644 aaPredicted RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 LIPFP07098 398 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 GTF2F2P13984 249 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SRD5A1P18405 259 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 RAB3BP20337 219 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 GATA3P23771 443 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SDC2P34741 201 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 GLIPR1P48060 266 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 BMXP51813 675 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 SRSF2Q01130 221 aaKnown RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 AESQ08117 197 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 KLRD1Q13241 179 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 UNC119Q13432 240 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 IL13RA2Q14627 380 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 ZNF674Q2M3X9 581 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 KLF17Q5JT82 389 aaPredicted RBP6.47□□□□□ -1.37
CDC42-201ENST00000315554 RUSC1-AS1Q66K80 236 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 TMEM200BQ69YZ2 307 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 TCF23Q7RTU1 214 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 RTN4RL2Q86UN3 420 aa6.47□□□□□ -1.37
CDC42-201ENST00000315554 CDH26Q8IXH8 852 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms