RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 UBE2V2Q15819 145 aa11.15□□□□□ -0.62
DDX39A-201ENST00000242776 ZNRF1Q8ND25 227 aa11.15□□□□□ -0.62
DDX39A-201ENST00000242776 DNAAF1Q8NEP3 725 aa11.15□□□□□ -0.62
DDX39A-201ENST00000242776 OR5P3Q8WZ94 311 aa11.15□□□□□ -0.62
DDX39A-201ENST00000242776 CENPOQ9BU64 300 aa11.15□□□□□ -0.62
DDX39A-201ENST00000242776 MEGF9Q9H1U4 602 aa11.15□□□□□ -0.62
DDX39A-201ENST00000242776 TMEM138Q9NPI0 162 aa11.15□□□□□ -0.62
DDX39A-201ENST00000242776 TRAV8-7A0A075B6U6 113 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 MAS1P04201 325 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 ALDOBP05062 364 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 PF4V1P10720 104 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
DDX39A-201ENST00000242776 RANBP1P43487 201 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 MTNR1BP49286 362 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 RBP2P50120 134 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 PSMD7P51665 324 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 GPM6AP51674 278 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 ATP1B3P54709 279 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 LSM3P62310 102 aaKnown RBP11.14□□□□□ -0.63
DDX39A-201ENST00000242776 DDI2Q5TDH0 399 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 ZNF529Q6P280 563 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 ZNF788Q6ZQV5 615 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 Q6ZS46 218 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 SLC16A12Q6ZSM3 486 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 LHFPL4Q7Z7J7 247 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 TPRA1Q86W33 373 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 TRMT10AQ8TBZ6 339 aaKnown RBP11.14□□□□□ -0.63
DDX39A-201ENST00000242776 PIFOQ8TCI5 191 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 HPSE2Q8WWQ2 592 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 C12orf43Q96C57 262 aaKnown RBP11.14□□□□□ -0.63
DDX39A-201ENST00000242776 ORAI1Q96D31 301 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 MED30Q96HR3 178 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 RNF170Q96K19 258 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 WWC2-AS2Q96NR7 200 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
DDX39A-201ENST00000242776 FAM230AA0A1W2PPH8 454 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 ZNF732B4DXR9 585 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 SLC22A1O15245 554 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 LGALS4P56470 323 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 ATPAF1Q5TC12 328 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-201ENST00000242776 GLT8D1Q68CQ7 371 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 ZNF573Q86YE8 665 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 CDH26Q8IXH8 852 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 OR51A2Q8NGJ7 313 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 OR5D13Q8NGL4 314 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 ANGPTL6Q8NI99 470 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 ISOC1Q96CN7 298 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 FOXRED1Q96CU9 486 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-201ENST00000242776 GPER1Q99527 375 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 NAA50Q9GZZ1 169 aaKnown RBP11.13□□□□□ -0.63
DDX39A-201ENST00000242776 BATF3Q9NR55 127 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 C19orf12Q9NSK7 152 aa11.13□□□□□ -0.63
DDX39A-201ENST00000242776 IGKV1-9A0A0C4DH69 117 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 PQLC2LA1A4F0 135 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 SIGLEC5O15389 551 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 PF4P02776 101 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 ACAA1P09110 424 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-201ENST00000242776 RAB3BP20337 219 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 VBP1P61758 197 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 ZNF782Q6ZMW2 699 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-201ENST00000242776 LRRTM1Q86UE6 522 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 DYNAPQ8N1N2 210 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 JAGN1Q8N5M9 183 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 OR4M1Q8NGD0 313 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 DMRTB1Q96MA1 342 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 PPIL3Q9H2H8 161 aaKnown RBP11.12□□□□□ -0.63
DDX39A-201ENST00000242776 NLKQ9UBE8 527 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 CEPT1Q9Y6K0 416 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 MEX3AA1L020 520 aaKnown RBP11.12□□□□□ -0.63
DDX39A-201ENST00000242776 OR2AT4A6NND4 320 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 ZNF701M0R085 212 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-201ENST00000242776 IL1AP01583 271 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 GLRA1P23415 457 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 ZNF93P35789 620 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-201ENST00000242776 SERPINB10P48595 397 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 MTCP1P56278 107 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 NCS1P62166 190 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 CTF1Q16619 201 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 DMRTC1Q5HYR2 192 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 UQCC2Q9BRT2 126 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 PRSS22Q9GZN4 317 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 FGF23Q9GZV9 251 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-201ENST00000242776 RNF167Q9H6Y7 350 aa11.12□□□□□ -0.63
DDX39A-201ENST00000242776 RSL24D1Q9UHA3 163 aaKnown RBP11.12□□□□□ -0.63
DDX39A-201ENST00000242776 IGKV1D-17A0A075B6S4 117 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 DPPA5A6NC42 116 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 RHBDL1O75783 438 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 CDRT1O95170 752 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 CYB5AP00167 134 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 CCL3L1P16619 93 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 SDC2P34741 201 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 VDAC2P45880 294 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-201ENST00000242776 HAAOP46952 286 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 CAV3P56539 151 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 BLCAPP62952 87 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 KISS1Q15726 138 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 OR5AU1Q8NGC0 362 aa11.11□□□□□ -0.63
DDX39A-201ENST00000242776 OR52N4Q8NGI2 321 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms