RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Syt6Q9R0N8 511 aa7.83□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Myh9Q8VDD5 1960 aaKnown RBP7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 TrioQ0KL02 3102 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gm45861A0A1B0GRY3 1923 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gm28729A0A1B0GSW2 409 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tmem236A2ARJ3 344 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr1206A2ATJ9 307 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 RerglB2RVE2 204 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gm9008E9PVG0 424 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 RrhO35214 337 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Entpd2O55026 495 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Apba3O88888 571 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Wdr5P61965 334 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 RhobP62746 196 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Sephs2P97364 452 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Kir3dl2Q673W2 388 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Znrf2Q71FD5 238 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Spag7Q7TNE3 227 aaKnown RBP7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr212Q7TS33 327 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Bdh1Q80XN0 343 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Smco3Q8BQM7 225 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gpr18Q8K1Z6 331 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gtf2h5Q8K2X8 71 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr960Q8VET5 316 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr669Q8VGU9 317 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Pycr1Q922W5 309 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tmem38bQ9DAV9 292 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Fam96aQ9DCL2 160 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr157Q9QZ20 318 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rab25Q9WTL2 213 aa7.82□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Zfp811A0A0J9YU71 552 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 A0A286YDU1 74 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr872E9PVW2 323 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr747E9PXH6 313 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Ctla2bP12400 113 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Zfp36l1P23950 338 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Fxyd5P97808 178 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Shisa6Q3UH99 525 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gm10735Q3US96 136 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr146Q60884 306 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Msi1Q61474 362 aaKnown RBP7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tex261Q62302 196 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Isg15Q64339 161 aaKnown RBP7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Clec4b2Q67DU8 208 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr907Q7TRC7 310 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr314Q7TRZ7 330 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Eif4ebp3Q80VV3 101 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Slco4c1Q8BGD4 722 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Fam49aQ8BHZ0 323 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 C1raQ8CG16 707 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tp53rkQ99PW4 244 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 HaghlQ9DB32 283 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr961Q9EQ84 314 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tnfrsf23Q9ER63 176 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Syt7Q9R0N7 403 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Slc7a7Q9Z1K8 510 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Taf1Q80UV9 1891 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 E130218I03RikA0A0U1RNU5 63 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr1124A2AT86 318 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 H2-ObO35424 271 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Hoxa1P09022 331 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 H2-Q8P14430 326 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gata1P17679 413 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Edn2P22389 175 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gcm1P70348 436 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 H2-Q6P79568 326 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Znf235Q61116 645 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 ScapQ6GQT6 1276 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr1222Q7TR02 311 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr885Q7TRE0 309 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Slc30a8Q8BGG0 367 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cbln4Q8BME9 198 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gm9961Q8BNV2 113 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Enpp4Q8BTJ4 456 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr734Q8VFT4 313 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr656Q8VGX9 329 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cwh43Q91YL7 699 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rab27bQ99P58 218 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Unc50Q9CQ61 259 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cers4Q9D6J1 393 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 EsdQ9R0P3 282 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tmem176bQ9R1Q6 263 aa7.81□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Pgbd5D3YZI9 523 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 B230217C12RikE9Q3Z1 139 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Vmn2r100E9QAZ9 850 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Fmo6J3QMN6 532 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Kcns2O35174 477 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Siva1O54926 175 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Galr2O88854 371 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Hoxa3P02831 443 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Hoxd3P09027 433 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gpx5P21765 221 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 MaxP28574 160 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 PpoxP51175 477 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Dhrs2Q149L0 282 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Alg6Q3TAE8 507 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cyp11b1Q3TG86 501 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Trappc13Q3TIR1 417 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Il31Q6EAL8 163 aa7.8□□□□□ -1.16
Upf3b-201ENSMUST00000076265 RimklaQ6PFX8 380 aa7.8□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms