RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Slc36a4Q8CH36 500 aa15.03■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Nova1Q9JKN6 507 aaKnown RBP15.03■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Abcd4O89016 606 aa15.03■□□□□ -0
Ccdc88a-201ENSMUST00000040182 P01810 119 aa15.03■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Rom1P32958 351 aa15.03■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Fpr1P33766 364 aa15.03■□□□□ -0
Ccdc88a-201ENSMUST00000040182 1700009N14RikQ14AA6 216 aaKnown RBP15.03■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Lcn12Q6JVL5 193 aa15.03■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Gm8660K7N6J2 305 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Klk1b9P15949 261 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 PtgirP43252 415 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Il10rbQ61190 349 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Tmem11Q8BK08 190 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Znf346Q9R0B7 294 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 2010315B03RikJ3QK55 433 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Tgfb1P04202 390 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Csf3P09920 208 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 H2-T3P14432 384 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Col19a1Q0VF58 1136 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 HrasQ61411 189 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Olfr344Q8VFP9 309 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Olfr1262Q8VGN2 304 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Tex43Q9D9I1 141 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Btbd8D3YUB6 377 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Olfr376E9Q4M1 320 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Rdh19G5E8H9 318 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Gm20834J3QM72 227 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Fgf7P36363 194 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Slc25a40Q8BGP6 337 aa15.02■□□□□ -0
Ccdc88a-201ENSMUST00000040182 Vmn1r15Q14C10 299 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Zfp772Q3UQL6 416 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Fam103a1Q9CQY2 119 aaKnown RBP15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r41Q9EQ44 310 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tmem182B2RVY9 229 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Znf8Q8BGV5 572 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ikzf5Q8BU00 419 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr351Q8VGK1 310 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Bcdin3dQ91YP1 285 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 PaplnQ9EPX2 1280 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm45800A0A1B0GT24 152 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm21788J3QNH3 180 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tmem267Q8VDR5 215 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gins1Q9CZ15 196 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Socs1O35716 212 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Hmx3P42581 356 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Glra1Q64018 457 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ffar1Q76JU9 300 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r4Q8R2D3 297 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tspan31Q9CQ88 210 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Wdr83Q9DAJ4 315 aaKnown RBP15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Trappc2lQ9JME7 139 aa15.02□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 CymB7ZWD6 379 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Dlx4P70436 240 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Usp22Q5DU02 525 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Sys1Q78S06 156 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Dtx3Q80V91 347 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tox3Q80W03 575 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Zfp964B2RR88 472 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 H1f0P10922 194 aaKnown RBP15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 MENTQ569E4 350 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Mmd2Q8R189 247 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 SmagpQ99KC7 97 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gpr27O54897 379 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 A4gntQ14BT6 341 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 DbhQ64237 622 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr308Q8VFP2 308 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr935Q8VG16 308 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tmem128Q9CZB9 163 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Plekha3Q9ERS4 297 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Pard6aQ9Z101 346 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 ThadaA8C756 1938 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 A0A286YDP4 300 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Nxpe5E0CX47 564 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r57K7N731 310 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 PcnpQ6P8I4 178 aaKnown RBP15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm9938Q8C3P5 112 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r8Q8R2C2 303 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Sec11cQ9D8V7 192 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Xlr5cQ9JJR2 179 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ighv1-78A0A0G2JGN3 117 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr921Q7TRC0 313 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Maf1Q9D0U6 258 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Abca4O35600 2310 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ubr3Q5U430 1889 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 NynrinQ5DTZ0 1840 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Wfdc16A2A5H4 111 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Zmat5Q9CQR5 170 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 P2ry2P35383 373 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Etv2P41163 335 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Rplp1P47955 114 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Fgf9P54130 208 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 SryQ05738 395 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Psmb6Q60692 238 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Klf3Q60980 344 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Hdhd3Q9CYW4 251 aa15.01□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1458A0A1L1SSD5 307 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Adamts8P57110 905 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Cpeb2Q812E0 521 aaKnown RBP15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Spsb1Q9D5L7 273 aa15□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr262Q8VFV8 312 aa15□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms