RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Fcer1aP20489 250 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Igfbp3P47878 292 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 A4gntQ14BT6 341 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Elavl2Q60899 360 aaKnown RBP8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Pafah1b3Q61205 232 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Slc35e3Q6PGC7 313 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Sys1Q78S06 156 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Olfr923Q7TRB9 317 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Lrp12Q8BUJ9 858 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Scgb2b26Q8JZX1 112 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Olfr790Q8VGJ3 322 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Rfpl4aQ8VH31 287 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Plekha3Q9ERS4 297 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Gm5239D3YYZ2 122 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Raet1aO08602 253 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Fut1O09160 376 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 P01881 257 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Ca6P18761 317 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Myf5P24699 255 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Pax4P32115 349 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 MplQ08351 625 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Olfr1507Q0VEP0 313 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Fa2hQ5MPP0 372 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 HykkQ5U5V2 376 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Smim4Q8C1Q6 80 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Il17rcQ8K4C2 698 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Olfr502Q8VG09 314 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Olfr1132Q8VG97 308 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Ddb2Q99J79 432 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 B3gat1Q9CW73 334 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Sec11cQ9D8V7 192 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Phyhd1Q9DB26 291 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Cxcl15Q9WVL7 167 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Tmem196V9GX04 182 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 NacaP70670 2187 aaKnown RBP8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Fbxw27A0A1D5RLF0 466 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Zfp300A2AE21 645 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Arxes1C0HK79 180 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Arxes2C0HK80 180 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Wnt9bO35468 359 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Tbx15O70306 602 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Fcn2O70497 314 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Dll3O88516 592 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 RelP15307 587 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Gcnt2P97402 401 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Npas1P97459 594 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Cass4Q08EC4 804 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Zfp235Q499D5 702 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Ctf1Q60753 203 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Cpeb4Q7TN98 729 aaKnown RBP8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Olfr1357Q7TQU7 313 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 P4htmQ8BG58 503 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Galnt6Q8C7U7 622 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Lgi3Q8K406 548 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Olfr1427Q8VFU9 311 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 GhitmQ91VC9 346 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Tnfrsf12aQ9CR75 129 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Pga5Q9D106 387 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Erv3Q9DAX3 200 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Slco1b2Q9JJL3 689 aa8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Eif3iQ9QZD9 325 aaKnown RBP8.9□□□□□ -0.98
Ldlr-201ENSMUST00000034713 Ssc4dA1L0T3 586 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Gm438B1ASB3 393 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Rdh16f1E9Q9P8 317 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Vmn1r27K7N688 303 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 P01654 111 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 P01656 111 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 P03977 111 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 NdnP25233 325 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 SryQ05738 395 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Nkx6-3Q3UHX8 262 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Rps27Q6ZWU9 84 aaKnown RBP8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 PigvQ7TPN3 493 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Olfr967Q7TRA6 310 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Alkal2Q80UG6 151 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Smim37Q8BT35 56 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 P2rx2Q8K3P1 485 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 ApehQ8R146 732 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Olfr1377Q8VGH1 307 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Olfr979Q8VH10 311 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 MrgprdQ91ZB8 321 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Sval1Q9D2X6 151 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Oc90Q9Z0L3 485 aa8.9□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Olfr914E9PW59 316 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 DffbO54788 344 aaKnown RBP8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Nipsnap1O55125 284 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 GzmaP11032 260 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 VtnP29788 478 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Ccr8P56484 353 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 EnsaP60840 121 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Pax6P63015 422 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Ear2P97425 156 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 ArsgQ3TYD4 525 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Olfr1386Q7TQT0 309 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Olfr921Q7TRC0 313 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Ip6k3Q8BWD2 396 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 RfxapQ8VCG9 231 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Olfr113Q8VEU4 312 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Olfr998Q8VF76 314 aa8.89□□□□□ -0.99
Ldlr-201ENSMUST00000034713 Lims1Q99JW4 325 aa8.89□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms