RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Olfr788Q8VFI0 311 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 ManfQ9CXI5 179 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Fxyd4Q9D2W0 88 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Nudt3Q9JI46 168 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Zfp979A2A799 407 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 SnrpnP63163 240 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 BadQ61337 204 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr138Q7TRI7 312 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Lhfpl2Q8BGA2 222 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Slc16a12Q8BGC3 486 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Tspan12Q8BKT6 305 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 AamdcQ8R0P4 122 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr136Q8VG72 312 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Osr2Q91ZD1 312 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Rpl11Q9CXW4 178 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Shisa5Q9D7I0 235 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Smdt1Q9DB10 107 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Tmem25Q9DCF1 365 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Scml2B1AVB3 969 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Gm14288E9Q9W0 88 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Gm9376G3UW68 176 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Degs1O09005 323 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Rab33bO35963 229 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 P01673 111 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 StumQ0VBF8 141 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Foxj1Q61660 421 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Zfp455Q7M6X9 461 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Muc20Q8BUE7 656 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr1102Q8VES2 324 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr919Q8VF78 315 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Odf4Q8VI88 290 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Rnps1Q99M28 305 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Ergic1Q9DC16 290 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Rtp4Q9ER80 249 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Kcnj10Q9JM63 379 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Cldn34dA2AGU5 210 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Stpg3A2RSX4 306 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Zfp456B2RUK9 458 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 RbpjlO08674 515 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 P01670 111 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 P01671 111 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 P01672 111 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Pax2P32114 414 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 KrasP32883 189 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Nkx2-2P42586 273 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 1700009N14RikQ14AA6 216 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Slc17a5Q8BN82 495 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Utp4Q8R2N2 686 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Rnf113a1Q8R3P8 341 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Ms4a6bQ99N09 244 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Q9D1K7 174 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Sec11cQ9D8V7 192 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr157Q9QZ20 318 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 A0A1L1STL9 112 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Zfp334A2A4U6 679 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr554E9Q546 317 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Wdr1O88342 606 aaKnown RBP8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 PpiaP17742 164 aaKnown RBP8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Prrx1P63013 245 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Dlx4P70436 240 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Defb28Q3V2L0 89 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Taar9Q5QD04 348 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Gramd2bQ6PEM6 445 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr266Q8VFC3 316 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr46Q8VGJ4 318 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Nudcd2Q9CQ48 157 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Vps25Q9CQ80 176 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 ReckQ9Z0J1 971 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 CckarO08786 436 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Lsm2O35900 95 aaKnown RBP8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Nipsnap1O55125 284 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Lmx1bO88609 395 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Phxr2P15972 65 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Cox5bP19536 128 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Csf2rbP26955 896 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 S1pr2P52592 352 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Col19a1Q0VF58 1136 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Q3V0E1 1183 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Npy4rQ61041 375 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Dlk2Q8K1E3 382 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Acaa1bQ8VCH0 424 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr51Q8VGG9 307 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Smim14Q91VT8 99 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Acaa1aQ921H8 424 aaKnown RBP8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Q9CRW3 126 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 N4bp2F8VQG7 1678 aaKnown RBP8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Scgb1b12A0A087WP21 93 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 A630073D07RikE9PWS6 100 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr1406E9Q8X1 310 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Zbtb25G3UW50 439 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Cldn1O88551 211 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 RhobP62746 196 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Cpeb1P70166 561 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 MybphlQ5FW53 355 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Ly6eQ64253 130 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 BocQ6AZB0 1110 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr1286Q7TQY2 305 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr1282Q7TQY5 305 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Ifna13Q80SU4 189 aa8.26□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Fbxo4Q8CHQ0 385 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms