RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 UFO1Q04511 668 aa0.1□□□□□ -2.39
snR53snR53 ABD1P32783 436 aaPredicted RBP0.09□□□□□ -2.4
snR53snR53 APL2P36000 726 aaPredicted RBP0.09□□□□□ -2.4
snR53snR53 APT2P36973 181 aa0.09□□□□□ -2.4
snR53snR53 SCO2P38072 301 aa0.09□□□□□ -2.4
snR53snR53 CTP1P38152 299 aa0.09□□□□□ -2.4
snR53snR53 KRE9P39005 276 aa0.09□□□□□ -2.4
snR53snR53 PIG2P40187 538 aa0.09□□□□□ -2.4
snR53snR53 IRC7P43623 340 aa0.09□□□□□ -2.4
snR53snR53 DIG1Q03063 452 aaKnown RBP0.09□□□□□ -2.4
snR53snR53 ATX2Q12067 313 aa0.09□□□□□ -2.4
snR53snR53 CHS5Q12114 671 aaKnown RBP0.09□□□□□ -2.4
snR53snR53 RDL1Q12305 139 aaKnown RBP0.09□□□□□ -2.4
snR53snR53 HAT1Q12341 374 aa0.09□□□□□ -2.4
snR53snR53 ERG20P08524 352 aaKnown RBP0.08□□□□□ -2.4
snR53snR53 PRP28P23394 588 aa0.08□□□□□ -2.4
snR53snR53 PEX1P24004 1043 aa0.08□□□□□ -2.4
snR53snR53 YCL002CP25565 263 aa0.08□□□□□ -2.4
snR53snR53 VBA3P25594 458 aa0.08□□□□□ -2.4
snR53snR53 GSY2P27472 705 aa0.08□□□□□ -2.4
snR53snR53 DUT1P33317 147 aa0.08□□□□□ -2.4
snR53snR53 VBA5P36172 582 aa0.08□□□□□ -2.4
snR53snR53 AVT5P38176 459 aa0.08□□□□□ -2.4
snR53snR53 KHA1P40309 873 aa0.08□□□□□ -2.4
snR53snR53 TOK1P40310 691 aa0.08□□□□□ -2.4
snR53snR53 CRZ1P53968 678 aa0.08□□□□□ -2.4
snR53snR53 ARG5,6Q01217 863 aa0.08□□□□□ -2.4
snR53snR53 YPL071CQ02864 156 aa0.08□□□□□ -2.4
snR53snR53 WHI5Q12416 295 aa0.08□□□□□ -2.4
snR53snR53 ZPS1Q12512 249 aa0.08□□□□□ -2.4
snR53snR53 DAL7P21826 554 aa0.07□□□□□ -2.4
snR53snR53 PPX1P38698 397 aa0.07□□□□□ -2.4
snR53snR53 YND1P40009 630 aa0.07□□□□□ -2.4
snR53snR53 SNF12P53628 566 aa0.07□□□□□ -2.4
snR53snR53 NOG2P53742 486 aaKnown RBP0.07□□□□□ -2.4
snR53snR53 VPS16Q03308 798 aa0.07□□□□□ -2.4
snR53snR53 THI21Q08975 551 aa0.07□□□□□ -2.4
snR53snR53 RNR1P21524 888 aaKnown RBP0.06□□□□□ -2.4
snR53snR53 COQ3P27680 312 aa0.06□□□□□ -2.4
snR53snR53 REC104P33323 182 aa0.06□□□□□ -2.4
snR53snR53 ELF1P36053 145 aa0.06□□□□□ -2.4
snR53snR53 BIT2P38346 545 aa0.06□□□□□ -2.4
snR53snR53 LRS4Q04087 347 aaKnown RBP0.06□□□□□ -2.4
snR53snR53 YDL012CQ12489 107 aa0.06□□□□□ -2.4
snR53snR53 YMR084WA2P2R3 262 aa0.05□□□□□ -2.4
snR53snR53 CBS2P14905 389 aa0.05□□□□□ -2.4
snR53snR53 ACO1P19414 778 aaKnown RBP RIP-Chip data0.05□□□□□ -2.4not detected
snR53snR53 MCM2P29469 868 aa0.05□□□□□ -2.4
snR53snR53 BET4Q00618 327 aa0.05□□□□□ -2.4
snR53snR53 RNY1Q02933 434 aaKnown RBP0.05□□□□□ -2.4
snR53snR53 BUL2Q03758 920 aaKnown RBP0.05□□□□□ -2.4
snR53snR53 SND1Q04007 877 aa0.05□□□□□ -2.4
snR53snR53 MCM21Q06675 368 aa0.05□□□□□ -2.4
snR53snR53 CYB2P00175 591 aa0.04□□□□□ -2.4
snR53snR53 CPA2P03965 1118 aaKnown RBP0.04□□□□□ -2.4
snR53snR53 YFL068WP0CX99 160 aa0.04□□□□□ -2.4
snR53snR53 YLL066W-AP0CY00 160 aa0.04□□□□□ -2.4
snR53snR53 YLL067W-AP0CY01 160 aa0.04□□□□□ -2.4
snR53snR53 PTH1P38876 190 aaKnown RBP0.04□□□□□ -2.4
snR53snR53 YHR218WP38899 603 aa0.04□□□□□ -2.4
snR53snR53 DAK1P54838 584 aaKnown RBP0.04□□□□□ -2.4
snR53snR53 ECM16Q04217 1267 aaKnown RBP0.04□□□□□ -2.4
snR53snR53 THI22Q06490 572 aa0.04□□□□□ -2.4
snR53snR53 HXT1P32465 570 aa0.03□□□□□ -2.4
snR53snR53 SRO77P38163 1010 aa0.03□□□□□ -2.4
snR53snR53 PIH1P38768 344 aa0.03□□□□□ -2.4
snR53snR53 SPG5P42933 373 aa0.03□□□□□ -2.4
snR53snR53 RFX1P48743 811 aa0.03□□□□□ -2.4
snR53snR53 TAD1P53065 400 aa0.03□□□□□ -2.4
snR53snR53 LCD1Q04377 747 aa0.03□□□□□ -2.4
snR53snR53 DIA2Q08496 732 aaPredicted RBP0.03□□□□□ -2.4
snR53snR53 ECM3Q99252 613 aa0.03□□□□□ -2.4
snR53snR53 FEN2P25621 512 aaKnown RBP0.02□□□□□ -2.41
snR53snR53 NTH1P32356 751 aa0.02□□□□□ -2.41
snR53snR53 SRP40P32583 406 aaPredicted RBP0.02□□□□□ -2.41
snR53snR53 RKM3P38222 552 aa0.02□□□□□ -2.41
snR53snR53 SET5P38890 526 aaKnown RBP0.02□□□□□ -2.41
snR53snR53 SIT1P39980 628 aa0.02□□□□□ -2.41
snR53snR53 NOP9P47077 666 aaKnown RBP0.02□□□□□ -2.41
snR53snR53 ZIP2P53061 704 aa0.02□□□□□ -2.41
snR53snR53 COX18P53239 316 aa0.02□□□□□ -2.41
snR53snR53 SPR28Q04921 423 aa0.02□□□□□ -2.41
snR53snR53 FMP42Q04991 504 aa0.02□□□□□ -2.41
snR53snR53 SPN1Q06505 410 aaPredicted RBP0.02□□□□□ -2.41
snR53snR53 ENV7Q12003 364 aa0.02□□□□□ -2.41
snR53snR53 CDC34P14682 295 aa0.01□□□□□ -2.41
snR53snR53 BZZ1P38822 633 aa0.01□□□□□ -2.41
snR53snR53 YIL092WP40497 633 aa0.01□□□□□ -2.41
snR53snR53 YFL015CP43578 164 aa0.01□□□□□ -2.41
snR53snR53 RBG2P53295 368 aaKnown RBP0.01□□□□□ -2.41
snR53snR53 GAL4P04386 881 aa0□□□□□ -2.41
snR53snR53 YML002WP0CF17 737 aa0□□□□□ -2.41
snR53snR53 NAT1P12945 854 aaKnown RBP0□□□□□ -2.41
snR53snR53 MSS1P32559 526 aaPredicted RBP0□□□□□ -2.41
snR53snR53 SHR5P41912 237 aa0□□□□□ -2.41
snR53snR53 SAE2P46946 345 aa0□□□□□ -2.41
snR53snR53 NIT3P49954 291 aa0□□□□□ -2.41
snR53snR53 COQ6P53318 479 aa0□□□□□ -2.41
snR53snR53 YNL018CP53976 612 aa0□□□□□ -2.41
snR53snR53 ORC4P54791 529 aa0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms