RNA–Protein interactions for RNA: YPR042C

PUF2, Transcript of PUF family mRNA-binding protein, yeast

Gene PUF2, Length 3,228 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUF2	YPR042C	YKL050C	P35736	922 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	TAF5	P38129	798 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	FAF1	P40546	346 aa	Predicted RBP	4.74	□□□□□ -1.65
PUF2	YPR042C	MIS1	P09440	975 aa	Known RBP	4.74	□□□□□ -1.65
PUF2	YPR042C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
PUF2	YPR042C	APN2	P38207	520 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	LYS14	P40971	790 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	IRC6	P43615	237 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	EXG2	P52911	562 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	YNR071C	P53757	342 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	ERO1	Q03103	563 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	ISA1	Q07821	250 aa	Predicted RBP	4.74	□□□□□ -1.65
PUF2	YPR042C	VPS5	Q92331	675 aa		4.74	□□□□□ -1.65
PUF2	YPR042C	SEM1	O94742	89 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	SIR1	P21691	654 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	APL1	P27351	700 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	UME6	P39001	836 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	TPA1	P40032	644 aa	Known RBP	4.73	□□□□□ -1.65
PUF2	YPR042C	RCR2	Q03446	210 aa	Known RBP	4.73	□□□□□ -1.65
PUF2	YPR042C	SNO4	Q04902	237 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	CDA1	Q06702	301 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	IWR1	Q07532	353 aa	Predicted RBP	4.73	□□□□□ -1.65
PUF2	YPR042C	HSP33	Q08914	237 aa	Known RBP	4.73	□□□□□ -1.65
PUF2	YPR042C	HSP32	Q08992	237 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	PHM7	Q12252	991 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	RFC5	P38251	354 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	APE4	P38821	490 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	GCR2	Q01722	534 aa		4.73	□□□□□ -1.65
PUF2	YPR042C	RIB2	Q12362	591 aa	Known RBP	4.73	□□□□□ -1.65
PUF2	YPR042C	RAD16	P31244	790 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	WHI3	P34761	661 aa	Known RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	PEX5	P35056	612 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	LRG1	P35688	1017 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	ABZ1	P37254	787 aa	Predicted RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	ENP2	P48234	707 aa	Known RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	MTR3	P48240	250 aa	Predicted RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	SYF1	Q04048	859 aa	Predicted RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	HSF1	P10961	833 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	BET2	P20133	325 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	IME1	P21190	360 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	AIM26	P32858	118 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	PXA2	P34230	853 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	SSP120	P39931	234 aa	Known RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	YGR012W	P53206	393 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	ORC4	P54791	529 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	GPR1	Q12361	961 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	ADE3	P07245	946 aa	Known RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	FUM1	P08417	488 aa	Known RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	RIT1	P23796	513 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	MUM2	P38236	366 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	YHR033W	P38690	423 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	VHS3	Q08438	674 aa		4.72	□□□□□ -1.65
PUF2	YPR042C	RVB2	Q12464	471 aa	Known RBP	4.72	□□□□□ -1.65
PUF2	YPR042C	FBP1	P09201	348 aa		4.71	□□□□□ -1.66
PUF2	YPR042C	SAK1	P38990	1142 aa		4.71	□□□□□ -1.66
PUF2	YPR042C	MFB1	Q04922	465 aa		4.71	□□□□□ -1.66
PUF2	YPR042C	YCG1	Q06680	1035 aa		4.71	□□□□□ -1.66
PUF2	YPR042C	PSK2	Q08217	1101 aa		4.71	□□□□□ -1.66
PUF2	YPR042C	CBF2	P32504	956 aa		4.71	□□□□□ -1.66
PUF2	YPR042C	NOP4	P37838	685 aa	Known RBP	4.71	□□□□□ -1.66
PUF2	YPR042C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
PUF2	YPR042C	YLF2	P38746	405 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	YHR078W	P38799	552 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	ACS1	Q01574	713 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	NSE5	Q03718	556 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	YDR444W	Q04093	687 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	PCD1	Q12524	340 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	ATG11	Q12527	1178 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	TEF4	P36008	412 aa	Known RBP	4.7	□□□□□ -1.66
PUF2	YPR042C	MSC2	Q03455	724 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	UTP21	Q06078	939 aa	Predicted RBP	4.7	□□□□□ -1.66
PUF2	YPR042C	IRC3	Q06683	689 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	PSR1	Q07800	427 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	YBR225W	P38321	900 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	ZRG8	P40021	1076 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	TAF4	P50105	388 aa		4.7	□□□□□ -1.66
PUF2	YPR042C	ARE2	P53629	642 aa	Known RBP	4.7	□□□□□ -1.66
PUF2	YPR042C	URA3	P03962	267 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	PYC1	P11154	1178 aa	Known RBP	4.69	□□□□□ -1.66
PUF2	YPR042C	FRD1	P32614	470 aa	Known RBP	4.69	□□□□□ -1.66
PUF2	YPR042C	ACO2	P39533	789 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	MMM1	P41800	426 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	RMD8	P43620	662 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	RCF1	Q03713	159 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	FRS1	P15624	595 aa	Known RBP	4.69	□□□□□ -1.66
PUF2	YPR042C	SGF29	P25554	259 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	CDC60	P26637	1090 aa	Known RBP	4.69	□□□□□ -1.66
PUF2	YPR042C	MET22	P32179	357 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	VPH1	P32563	840 aa	Known RBP	4.69	□□□□□ -1.66
PUF2	YPR042C	CNS1	P33313	385 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	MTH1	P35198	433 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	MRPL36	P36531	177 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	CTF8	P38877	133 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	KHA1	P40309	873 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	BUD8	P41698	603 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	SQS1	P53866	767 aa	Known RBP	4.69	□□□□□ -1.66
PUF2	YPR042C	TIM50	Q02776	476 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	AAD4	Q07747	329 aa		4.69	□□□□□ -1.66
PUF2	YPR042C	KIN2	P13186	1147 aa	Known RBP	4.68	□□□□□ -1.66
PUF2	YPR042C	RED1	P14291	827 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms