RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W KTR4P38131 464 aa2.92□□□□□ -1.94
BRO1YPL084W NUP60P39705 539 aa2.92□□□□□ -1.94
BRO1YPL084W NOP2P40991 618 aaKnown RBP2.92□□□□□ -1.94
BRO1YPL084W BUD8P41698 603 aa2.92□□□□□ -1.94
BRO1YPL084W YJL163CP46996 555 aa2.92□□□□□ -1.94
BRO1YPL084W BIT61P47041 543 aa2.92□□□□□ -1.94
BRO1YPL084W RNT1Q02555 471 aa2.92□□□□□ -1.94
BRO1YPL084W YLR040CQ07988 224 aa2.92□□□□□ -1.94
BRO1YPL084W RPS9BP05755 195 aaKnown RBP2.91□□□□□ -1.94
BRO1YPL084W ALG7P07286 448 aa2.91□□□□□ -1.94
BRO1YPL084W SEC15P22224 910 aa2.91□□□□□ -1.94
BRO1YPL084W PEX1P24004 1043 aa2.91□□□□□ -1.94
BRO1YPL084W MVD1P32377 396 aaKnown RBP2.91□□□□□ -1.94
BRO1YPL084W MF(ALPHA)2P32435 120 aa2.91□□□□□ -1.94
BRO1YPL084W YPT7P32939 208 aa2.91□□□□□ -1.94
BRO1YPL084W SRP68P38687 599 aaKnown RBP2.91□□□□□ -1.94
BRO1YPL084W BCD1P38772 366 aa2.91□□□□□ -1.94
BRO1YPL084W TPM2P40414 161 aa2.91□□□□□ -1.94
BRO1YPL084W TAF4P50105 388 aa2.91□□□□□ -1.94
BRO1YPL084W POM34Q12445 299 aa2.91□□□□□ -1.94
BRO1YPL084W YEF3P16521 1044 aaKnown RBP2.91□□□□□ -1.94
BRO1YPL084W YHR033WP38690 423 aa2.91□□□□□ -1.94
BRO1YPL084W CCT3P39077 534 aaKnown RBP2.91□□□□□ -1.94
BRO1YPL084W EAF5P39995 279 aa2.91□□□□□ -1.94
BRO1YPL084W UBC11P52492 156 aa2.91□□□□□ -1.94
BRO1YPL084W ATP4P05626 244 aa2.9□□□□□ -1.94
BRO1YPL084W ACO1P19414 778 aaKnown RBP RIP-Chip data2.9□□□□□ -1.94not detected
BRO1YPL084W PRP22P24384 1145 aaKnown RBP2.9□□□□□ -1.94
BRO1YPL084W KIN82P25341 720 aa2.9□□□□□ -1.94
BRO1YPL084W GIP4P39732 760 aa2.9□□□□□ -1.94
BRO1YPL084W HOL1P53389 586 aa2.9□□□□□ -1.94
BRO1YPL084W MET14Q02196 202 aa2.9□□□□□ -1.94
BRO1YPL084W ADY4Q05955 493 aa2.9□□□□□ -1.94
BRO1YPL084W THI22Q06490 572 aa2.9□□□□□ -1.94
BRO1YPL084W GAL1P04385 528 aa2.9□□□□□ -1.95
BRO1YPL084W YEL076C-AP0CX16 216 aa2.9□□□□□ -1.95
BRO1YPL084W YLR464WP0CX17 216 aa2.9□□□□□ -1.95
BRO1YPL084W PMI40P29952 429 aaKnown RBP2.9□□□□□ -1.95
BRO1YPL084W TRM2P33753 639 aa2.9□□□□□ -1.95
BRO1YPL084W SFB3P38810 929 aa2.9□□□□□ -1.95
BRO1YPL084W REV7P38927 245 aa2.9□□□□□ -1.95
BRO1YPL084W YEL076CP39971 216 aa2.9□□□□□ -1.95
BRO1YPL084W IRC5P43610 853 aa2.9□□□□□ -1.95
BRO1YPL084W ENP2P48234 707 aaKnown RBP2.9□□□□□ -1.95
BRO1YPL084W PAN2P53010 1115 aaPredicted RBP2.9□□□□□ -1.95
BRO1YPL084W KIN4Q01919 800 aa2.9□□□□□ -1.95
BRO1YPL084W OMS1Q06668 471 aa2.9□□□□□ -1.95
BRO1YPL084W YOL073CQ08232 322 aa2.9□□□□□ -1.95
BRO1YPL084W PPR1P07272 904 aaPredicted RBP2.89□□□□□ -1.95
BRO1YPL084W KCC4P25389 1037 aa2.89□□□□□ -1.95
BRO1YPL084W PRE4P30657 266 aa2.89□□□□□ -1.95
BRO1YPL084W BCS1P32839 456 aa2.89□□□□□ -1.95
BRO1YPL084W YIL077CP40508 320 aa2.89□□□□□ -1.95
BRO1YPL084W NSE5Q03718 556 aa2.89□□□□□ -1.95
BRO1YPL084W PPN1Q04119 674 aa2.89□□□□□ -1.95
BRO1YPL084W ZRT2Q12436 422 aa2.89□□□□□ -1.95
BRO1YPL084W YKL133CP36066 463 aa2.89□□□□□ -1.95
BRO1YPL084W PPS1P38148 807 aa2.89□□□□□ -1.95
BRO1YPL084W COS111P38308 924 aa2.89□□□□□ -1.95
BRO1YPL084W HRB1P38922 454 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
BRO1YPL084W YIL092WP40497 633 aa2.89□□□□□ -1.95
BRO1YPL084W PIP2P52960 996 aa2.89□□□□□ -1.95
BRO1YPL084W YMR206WQ03695 313 aa2.89□□□□□ -1.95
BRO1YPL084W YKL033W-AQ86ZR7 236 aa2.89□□□□□ -1.95
BRO1YPL084W FEN2P25621 512 aaKnown RBP2.88□□□□□ -1.95
BRO1YPL084W STL1P39932 569 aa2.88□□□□□ -1.95
BRO1YPL084W FMP52P40008 231 aa2.88□□□□□ -1.95
BRO1YPL084W MTD1Q02046 320 aaKnown RBP2.88□□□□□ -1.95
BRO1YPL084W YFT2Q06676 274 aa2.88□□□□□ -1.95
BRO1YPL084W NUR1Q12066 484 aa2.88□□□□□ -1.95
BRO1YPL084W YKL222CP35995 705 aa2.88□□□□□ -1.95
BRO1YPL084W CDS1P38221 457 aa2.88□□□□□ -1.95
BRO1YPL084W PIG2P40187 538 aa2.88□□□□□ -1.95
BRO1YPL084W PRM2P40534 656 aa2.88□□□□□ -1.95
BRO1YPL084W RFX1P48743 811 aa2.88□□□□□ -1.95
BRO1YPL084W SUN4P53616 420 aa2.88□□□□□ -1.95
BRO1YPL084W CNM67P53865 581 aaKnown RBP2.88□□□□□ -1.95
BRO1YPL084W TUB2P02557 457 aaKnown RBP2.87□□□□□ -1.95
BRO1YPL084W HOP1P20050 605 aa2.87□□□□□ -1.95
BRO1YPL084W YCR015CP25616 317 aa2.87□□□□□ -1.95
BRO1YPL084W PTP2P29461 750 aa2.87□□□□□ -1.95
BRO1YPL084W PHO11P35842 467 aa2.87□□□□□ -1.95
BRO1YPL084W RMA1P36001 430 aaKnown RBP2.87□□□□□ -1.95
BRO1YPL084W PHO12P38693 467 aa2.87□□□□□ -1.95
BRO1YPL084W CRG1P38892 291 aaRIP-Chip data2.87□□□□□ -1.95 RIP-Chip
BRO1YPL084W HIS6P40545 261 aa2.87□□□□□ -1.95
BRO1YPL084W AIM21P40563 679 aa2.87□□□□□ -1.95
BRO1YPL084W ASK10P48361 1146 aa2.87□□□□□ -1.95
BRO1YPL084W TAN1P53072 289 aaPredicted RBP2.87□□□□□ -1.95
BRO1YPL084W SQS1P53866 767 aaKnown RBP2.87□□□□□ -1.95
BRO1YPL084W CHS5Q12114 671 aaKnown RBP2.87□□□□□ -1.95
BRO1YPL084W PHO3P24031 467 aa2.87□□□□□ -1.95
BRO1YPL084W MTC7P32633 139 aa2.87□□□□□ -1.95
BRO1YPL084W FTR1P40088 404 aa2.87□□□□□ -1.95
BRO1YPL084W SPO1P53541 631 aa2.87□□□□□ -1.95
BRO1YPL084W URN1Q06525 465 aaKnown RBP2.87□□□□□ -1.95
BRO1YPL084W MLC2Q06580 163 aa2.87□□□□□ -1.95
BRO1YPL084W MLH3Q12083 715 aa2.87□□□□□ -1.95
BRO1YPL084W RTK1Q12100 620 aaPredicted RBP2.87□□□□□ -1.95
BRO1YPL084W SIR3P06701 978 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms