RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W YJR142WP47173 342 aa4.22□□□□□ -1.73
VPS17YOR132W ARP4P80428 489 aa4.22□□□□□ -1.73
VPS17YOR132W YGR161W-CQ3E744 92 aa4.22□□□□□ -1.73
VPS17YOR132W DNF1P32660 1571 aa4.22□□□□□ -1.73
VPS17YOR132W APN2P38207 520 aa4.22□□□□□ -1.73
VPS17YOR132W SET2P46995 733 aaKnown RBP4.22□□□□□ -1.73
VPS17YOR132W MTL1P53214 551 aa4.22□□□□□ -1.73
VPS17YOR132W GPD1Q00055 391 aaKnown RBP4.22□□□□□ -1.73
VPS17YOR132W TMN2Q04562 672 aa4.22□□□□□ -1.73
VPS17YOR132W SGO1Q08490 590 aa4.22□□□□□ -1.73
VPS17YOR132W RPA190P10964 1664 aaKnown RBP4.21□□□□□ -1.74
VPS17YOR132W SSZ1P38788 538 aaKnown RBP4.21□□□□□ -1.74
VPS17YOR132W YJR039WP47107 1121 aa4.21□□□□□ -1.74
VPS17YOR132W YAP1802P53309 568 aa4.21□□□□□ -1.74
VPS17YOR132W BRE5P53741 515 aaKnown RBP4.21□□□□□ -1.74
VPS17YOR132W LEE1Q02799 301 aaKnown RBP4.21□□□□□ -1.74
VPS17YOR132W HMO1Q03973 246 aaKnown RBP4.21□□□□□ -1.74
VPS17YOR132W GEA2P39993 1459 aaKnown RBP4.2□□□□□ -1.74
VPS17YOR132W RNR1P21524 888 aaKnown RBP4.2□□□□□ -1.74
VPS17YOR132W MAL31P38156 614 aa4.2□□□□□ -1.74
VPS17YOR132W PCL5P38794 229 aa4.2□□□□□ -1.74
VPS17YOR132W LYS9P38999 446 aa4.2□□□□□ -1.74
VPS17YOR132W NUP60P39705 539 aa4.2□□□□□ -1.74
VPS17YOR132W TEL2P53038 688 aa4.2□□□□□ -1.74
VPS17YOR132W SSL2Q00578 843 aa4.2□□□□□ -1.74
VPS17YOR132W THI73Q07904 523 aa4.2□□□□□ -1.74
VPS17YOR132W YKL033W-AQ86ZR7 236 aa4.2□□□□□ -1.74
VPS17YOR132W HRP1Q99383 534 aaKnown RBP4.2□□□□□ -1.74
VPS17YOR132W NTE1Q04958 1679 aa4.2□□□□□ -1.74
VPS17YOR132W GDB1Q06625 1536 aa4.2□□□□□ -1.74
VPS17YOR132W RPO21P04050 1733 aaKnown RBP4.2□□□□□ -1.74
VPS17YOR132W PYC1P11154 1178 aaKnown RBP4.19□□□□□ -1.74
VPS17YOR132W ERG6P25087 383 aaKnown RBP4.19□□□□□ -1.74
VPS17YOR132W MVD1P32377 396 aaKnown RBP4.19□□□□□ -1.74
VPS17YOR132W HIR1P32479 840 aa4.19□□□□□ -1.74
VPS17YOR132W AKL1P38080 1108 aaKnown RBP4.19□□□□□ -1.74
VPS17YOR132W FMO1P38866 432 aa4.19□□□□□ -1.74
VPS17YOR132W CKB2P38930 258 aa4.19□□□□□ -1.74
VPS17YOR132W BFA1P47113 574 aa4.19□□□□□ -1.74
VPS17YOR132W COX18P53239 316 aa4.19□□□□□ -1.74
VPS17YOR132W DIA2Q08496 732 aaPredicted RBP4.19□□□□□ -1.74
VPS17YOR132W DCS2Q12123 353 aa4.19□□□□□ -1.74
VPS17YOR132W CAT8P39113 1433 aa4.19□□□□□ -1.74
VPS17YOR132W SIR3P06701 978 aa4.19□□□□□ -1.74
VPS17YOR132W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74 RIP-Chip
VPS17YOR132W YKR075CP36155 307 aa4.19□□□□□ -1.74
VPS17YOR132W UBP12P39538 1254 aa4.19□□□□□ -1.74
VPS17YOR132W STU2P46675 888 aa4.19□□□□□ -1.74
VPS17YOR132W PMT3P47190 753 aa4.19□□□□□ -1.74
VPS17YOR132W YGL081WP53156 320 aa4.19□□□□□ -1.74
VPS17YOR132W ARO1P08566 1588 aaKnown RBP4.18□□□□□ -1.74
VPS17YOR132W PEX1P24004 1043 aa4.18□□□□□ -1.74
VPS17YOR132W TYS1P36421 394 aaKnown RBP4.18□□□□□ -1.74
VPS17YOR132W CBR1P38626 284 aaKnown RBP4.18□□□□□ -1.74
VPS17YOR132W TDA3P38758 523 aa4.18□□□□□ -1.74
VPS17YOR132W YHR202WP38887 602 aa4.18□□□□□ -1.74
VPS17YOR132W SDS3P40505 327 aa4.18□□□□□ -1.74
VPS17YOR132W NOP2P40991 618 aaKnown RBP4.18□□□□□ -1.74
VPS17YOR132W RET2P43621 546 aa4.18□□□□□ -1.74
VPS17YOR132W YJR096WP47137 282 aa4.18□□□□□ -1.74
VPS17YOR132W PAN2P53010 1115 aaPredicted RBP4.18□□□□□ -1.74
VPS17YOR132W GND2P53319 492 aa4.18□□□□□ -1.74
VPS17YOR132W YNR029CP53729 429 aaKnown RBP4.18□□□□□ -1.74
VPS17YOR132W ISA1Q07821 250 aaPredicted RBP4.18□□□□□ -1.74
VPS17YOR132W PRP19P32523 503 aaKnown RBP4.17□□□□□ -1.74
VPS17YOR132W SFB3P38810 929 aa4.17□□□□□ -1.74
VPS17YOR132W CRP1P38845 465 aaKnown RBP4.17□□□□□ -1.74
VPS17YOR132W YEN1P40028 759 aa4.17□□□□□ -1.74
VPS17YOR132W GET2P40056 285 aa4.17□□□□□ -1.74
VPS17YOR132W NOP9P47077 666 aaKnown RBP4.17□□□□□ -1.74
VPS17YOR132W YDL121CQ07541 149 aa4.17□□□□□ -1.74
VPS17YOR132W CLF1Q12309 687 aaPredicted RBP4.17□□□□□ -1.74
VPS17YOR132W PDR10P51533 1564 aa4.17□□□□□ -1.74
VPS17YOR132W RPA135P22138 1203 aaKnown RBP4.16□□□□□ -1.74
VPS17YOR132W MTH1P35198 433 aa4.16□□□□□ -1.74
VPS17YOR132W ENP1P38333 483 aaKnown RBP4.16□□□□□ -1.74
VPS17YOR132W BEM4P39011 633 aa4.16□□□□□ -1.74
VPS17YOR132W YNL195CP40168 261 aa4.16□□□□□ -1.74
VPS17YOR132W ECM16Q04217 1267 aaKnown RBP4.16□□□□□ -1.74
VPS17YOR132W IRC10Q08118 586 aa4.16□□□□□ -1.74
VPS17YOR132W SRB8P25648 1427 aa4.16□□□□□ -1.74
VPS17YOR132W GRX7P38068 203 aa4.16□□□□□ -1.74
VPS17YOR132W RSC8P43609 557 aaKnown RBP4.16□□□□□ -1.74
VPS17YOR132W UME1Q03010 460 aa4.16□□□□□ -1.74
VPS17YOR132W MTQ2Q03920 221 aaPredicted RBP4.16□□□□□ -1.74
VPS17YOR132W VHS3Q08438 674 aa4.16□□□□□ -1.74
VPS17YOR132W ZRT2Q12436 422 aa4.16□□□□□ -1.74
VPS17YOR132W ECM3Q99252 613 aa4.16□□□□□ -1.74
VPS17YOR132W NUP145P49687 1317 aa4.15□□□□□ -1.74
VPS17YOR132W NUP159P40477 1460 aa4.15□□□□□ -1.74
VPS17YOR132W CDC43P18898 376 aa4.15□□□□□ -1.75
VPS17YOR132W SEC6P32844 805 aa4.15□□□□□ -1.75
VPS17YOR132W PHO11P35842 467 aa4.15□□□□□ -1.75
VPS17YOR132W PHO12P38693 467 aa4.15□□□□□ -1.75
VPS17YOR132W HRB1P38922 454 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
VPS17YOR132W QRI1P43123 477 aaKnown RBP4.15□□□□□ -1.75
VPS17YOR132W FHN1P53279 174 aa4.15□□□□□ -1.75
VPS17YOR132W YMR210WQ03649 449 aa4.15□□□□□ -1.75
VPS17YOR132W MRH1Q12117 320 aaPredicted RBP4.15□□□□□ -1.75
VPS17YOR132W PDR12Q02785 1511 aa4.14□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms