RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT1	YNR001C	HSL7	P38274	827 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	PNT1	P38969	423 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	TSC11	P40061	1430 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	CCT5	P40413	562 aa	Known RBP	4.26	□□□□□ -1.73
CIT1	YNR001C	BNA2	P47125	453 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	GCV2	P49095	1034 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	HFM1	P51979	1187 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	NPY1	P53164	384 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	VPS62	P53285	467 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	ECM9	Q02202	377 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	MSC2	Q03455	724 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	TMA10	Q06177	86 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	YLR352W	Q06479	807 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	ACK1	Q07622	623 aa	Predicted RBP	4.26	□□□□□ -1.73
CIT1	YNR001C	GPB1	Q08886	897 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	YOL114C	Q12322	202 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	BNR1	P40450	1375 aa		4.26	□□□□□ -1.73
CIT1	YNR001C	TOP2	P06786	1428 aa	Known RBP	4.25	□□□□□ -1.73
CIT1	YNR001C	YSP2	Q06681	1438 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	CDC12	P32468	407 aa	Known RBP	4.25	□□□□□ -1.73
CIT1	YNR001C	YKL050C	P35736	922 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	ESL1	P40456	1118 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	ERR3	P42222	437 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	ALY2	P47029	1046 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	RNR4	P49723	345 aa	Known RBP	4.25	□□□□□ -1.73
CIT1	YNR001C	MTC3	P53077	123 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	HOL1	P53389	586 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	CNM67	P53865	581 aa	Known RBP	4.25	□□□□□ -1.73
CIT1	YNR001C	TRS130	Q03660	1102 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	YDR338C	Q05497	695 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	XYL2	Q07993	356 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	CDC45	Q08032	650 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	MLP2	P40457	1679 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	YPR117W	Q06116	2489 aa		4.25	□□□□□ -1.73
CIT1	YNR001C	PET309	P32522	965 aa	Predicted RBP	4.24	□□□□□ -1.73
CIT1	YNR001C	YKL151C	P36059	337 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	ERT1	P38140	529 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	SAW1	P39735	261 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	KAP123	P40069	1113 aa	Known RBP	4.24	□□□□□ -1.73
CIT1	YNR001C	YFR016C	P43597	1233 aa	Known RBP	4.24	□□□□□ -1.73
CIT1	YNR001C	MPP10	P47083	593 aa	Known RBP	4.24	□□□□□ -1.73
CIT1	YNR001C	ASK10	P48361	1146 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	GTF1	P53260	183 aa	Predicted RBP	4.24	□□□□□ -1.73
CIT1	YNR001C	TEP1	P53916	434 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	TIM50	Q02776	476 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	YAP6	Q03935	383 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	ECM38	Q05902	660 aa	Predicted RBP	4.24	□□□□□ -1.73
CIT1	YNR001C	RXT3	Q07458	294 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	ACM1	Q08981	209 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	HMI1	Q12039	706 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	KCS1	Q12494	1050 aa		4.24	□□□□□ -1.73
CIT1	YNR001C	SRB8	P25648	1427 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	TUB2	P02557	457 aa	Known RBP	4.23	□□□□□ -1.73
CIT1	YNR001C	MRP7	P12687	371 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	KIN2	P13186	1147 aa	Known RBP	4.23	□□□□□ -1.73
CIT1	YNR001C	NUP120	P35729	1037 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	VPS8	P39702	1274 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	SHR5	P41912	237 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	ZIP2	P53061	704 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	MEP3	P53390	489 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	ERO1	Q03103	563 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	RCF1	Q03713	159 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	ENV7	Q12003	364 aa		4.23	□□□□□ -1.73
CIT1	YNR001C	HOM3	P10869	527 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	FUR1	P18562	216 aa	Known RBP	4.22	□□□□□ -1.73
CIT1	YNR001C	RFA1	P22336	621 aa	Known RBP	4.22	□□□□□ -1.73
CIT1	YNR001C	EMC1	P25574	760 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	CCR4	P31384	837 aa	Known RBP	4.22	□□□□□ -1.73
CIT1	YNR001C	NGG1	P32494	702 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	SLC1	P33333	303 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	FAF1	P40546	346 aa	Predicted RBP	4.22	□□□□□ -1.73
CIT1	YNR001C	SMK1	P41808	388 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	SGM1	P47166	707 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	UBC9	P50623	157 aa	Predicted RBP	4.22	□□□□□ -1.73
CIT1	YNR001C	RSC1	P53236	928 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	SLI1	P53304	468 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	YLR224W	Q05947	369 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	YPR196W	Q06595	470 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	PNS1	Q12412	539 aa		4.22	□□□□□ -1.73
CIT1	YNR001C	RPS21A	P0C0V8	87 aa	Known RBP	4.21	□□□□□ -1.73
CIT1	YNR001C	PGS1	P25578	521 aa		4.21	□□□□□ -1.73
CIT1	YNR001C	CDC48	P25694	835 aa	Known RBP	4.21	□□□□□ -1.73
CIT1	YNR001C	IME2	P32581	645 aa		4.21	□□□□□ -1.73
CIT1	YNR001C	RPT3	P33298	428 aa	Known RBP	4.21	□□□□□ -1.73
CIT1	YNR001C	YPT53	P36019	220 aa		4.21	□□□□□ -1.73
CIT1	YNR001C	SDS22	P36047	338 aa		4.21	□□□□□ -1.73
CIT1	YNR001C	SAP190	P36123	1033 aa		4.21	□□□□□ -1.73
CIT1	YNR001C	YKR078W	P36158	585 aa	Known RBP	4.21	□□□□□ -1.73
CIT1	YNR001C	MUM2	P38236	366 aa		4.21	□□□□□ -1.73
CIT1	YNR001C	MCM6	P53091	1017 aa	Known RBP	4.21	□□□□□ -1.73
CIT1	YNR001C	RBG2	P53295	368 aa	Known RBP	4.21	□□□□□ -1.73
CIT1	YNR001C	NUR1	Q12066	484 aa		4.21	□□□□□ -1.73
CIT1	YNR001C	CAT8	P39113	1433 aa		4.21	□□□□□ -1.74
CIT1	YNR001C	YLR419W	Q06698	1435 aa	Known RBP	4.21	□□□□□ -1.74
CIT1	YNR001C	VPS13	Q07878	3144 aa		4.21	□□□□□ -1.74
CIT1	YNR001C	DIF1	O13577	133 aa		4.21	□□□□□ -1.74
CIT1	YNR001C	HOP1	P20050	605 aa		4.21	□□□□□ -1.74
CIT1	YNR001C	DAL7	P21826	554 aa		4.21	□□□□□ -1.74
CIT1	YNR001C	SEC65	P29478	273 aa		4.21	□□□□□ -1.74
CIT1	YNR001C	XRS2	P33301	854 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms