RNA–Protein interactions for RNA: YMR233W

TRI1, Transcript of Non-essential sumoylated protein of unknown function, yeast

Gene TRI1, Length 681 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRI1	YMR233W	MCH5	Q08777	521 aa		4.68	□□□□□ -1.66
TRI1	YMR233W	GLN4	P13188	809 aa	Known RBP	4.67	□□□□□ -1.66
TRI1	YMR233W	BCS1	P32839	456 aa		4.67	□□□□□ -1.66
TRI1	YMR233W	SER1	P33330	395 aa	Known RBP	4.67	□□□□□ -1.66
TRI1	YMR233W	PHO11	P35842	467 aa		4.67	□□□□□ -1.66
TRI1	YMR233W	YBR071W	P38243	211 aa		4.67	□□□□□ -1.66
TRI1	YMR233W	ENP1	P38333	483 aa	Known RBP	4.67	□□□□□ -1.66
TRI1	YMR233W	PHO12	P38693	467 aa		4.67	□□□□□ -1.66
TRI1	YMR233W	NOP2	P40991	618 aa	Known RBP	4.67	□□□□□ -1.66
TRI1	YMR233W	BUD8	P41698	603 aa		4.67	□□□□□ -1.66
TRI1	YMR233W	YML122C	Q03207	126 aa		4.67	□□□□□ -1.66
TRI1	YMR233W	DIA2	Q08496	732 aa	Predicted RBP	4.67	□□□□□ -1.66
TRI1	YMR233W	POM34	Q12445	299 aa		4.67	□□□□□ -1.66
TRI1	YMR233W	MRC1	P25588	1096 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	PCL5	P38794	229 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	SDS3	P40505	327 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	VID28	P40547	921 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	COG6	P53959	839 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	SMX3	P54999	86 aa	Predicted RBP	4.66	□□□□□ -1.66
TRI1	YMR233W	TIM44	Q01852	431 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	TMN2	Q04562	672 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	HBT1	Q07653	1046 aa	Known RBP	4.66	□□□□□ -1.66
TRI1	YMR233W	TRE2	Q08693	809 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	MLH3	Q12083	715 aa		4.66	□□□□□ -1.66
TRI1	YMR233W	CLF1	Q12309	687 aa	Predicted RBP	4.66	□□□□□ -1.66
TRI1	YMR233W	THR1	P17423	357 aa	Known RBP	4.65	□□□□□ -1.67
TRI1	YMR233W	AEP2	P22136	580 aa		4.65	□□□□□ -1.67
TRI1	YMR233W	PRP28	P23394	588 aa		4.65	□□□□□ -1.67
TRI1	YMR233W	KIN82	P25341	720 aa		4.65	□□□□□ -1.67
TRI1	YMR233W	FEN2	P25621	512 aa	Known RBP	4.65	□□□□□ -1.67
TRI1	YMR233W	SSL2	Q00578	843 aa		4.65	□□□□□ -1.67
TRI1	YMR233W	SKY1	Q03656	742 aa		4.65	□□□□□ -1.67
TRI1	YMR233W	NSE5	Q03718	556 aa		4.65	□□□□□ -1.67
TRI1	YMR233W	VBA4	Q04602	768 aa	Known RBP	4.65	□□□□□ -1.67
TRI1	YMR233W	CHS5	Q12114	671 aa	Known RBP	4.65	□□□□□ -1.67
TRI1	YMR233W	ZRT2	Q12436	422 aa		4.65	□□□□□ -1.67
TRI1	YMR233W	RMP1	Q12530	201 aa		4.65	□□□□□ -1.67
TRI1	YMR233W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
TRI1	YMR233W	MF(ALPHA)2	P32435	120 aa		4.64	□□□□□ -1.67
TRI1	YMR233W	MSS1	P32559	526 aa	Predicted RBP	4.64	□□□□□ -1.67
TRI1	YMR233W	UBS1	P38290	277 aa		4.64	□□□□□ -1.67
TRI1	YMR233W	DUN1	P39009	513 aa		4.64	□□□□□ -1.67
TRI1	YMR233W	PIG2	P40187	538 aa		4.64	□□□□□ -1.67
TRI1	YMR233W	PXA1	P41909	870 aa		4.64	□□□□□ -1.67
TRI1	YMR233W	RFX1	P48743	811 aa		4.64	□□□□□ -1.67
TRI1	YMR233W	YFT2	Q06676	274 aa		4.64	□□□□□ -1.67
TRI1	YMR233W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
TRI1	YMR233W	ATP12	P22135	325 aa		4.63	□□□□□ -1.67
TRI1	YMR233W	YIL077C	P40508	320 aa		4.63	□□□□□ -1.67
TRI1	YMR233W	TAF4	P50105	388 aa		4.63	□□□□□ -1.67
TRI1	YMR233W	SPO1	P53541	631 aa		4.63	□□□□□ -1.67
TRI1	YMR233W	PPN1	Q04119	674 aa		4.63	□□□□□ -1.67
TRI1	YMR233W	YPR027C	Q12079	277 aa		4.63	□□□□□ -1.67
TRI1	YMR233W	PRP22	P24384	1145 aa	Known RBP	4.62	□□□□□ -1.67
TRI1	YMR233W	PRE4	P30657	266 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	HXT4	P32467	576 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	MTC7	P32633	139 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	MTH1	P35198	433 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	SET3	P36124	751 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	COS111	P38308	924 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	NDC80	P40460	691 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	CCT7	P42943	550 aa	Known RBP	4.62	□□□□□ -1.67
TRI1	YMR233W	MPS3	P47069	682 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	RNR4	P49723	345 aa	Known RBP	4.62	□□□□□ -1.67
TRI1	YMR233W	GND2	P53319	492 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	USV1	Q12132	391 aa		4.62	□□□□□ -1.67
TRI1	YMR233W	RPS9B	P05755	195 aa	Known RBP	4.61	□□□□□ -1.67
TRI1	YMR233W	HEM12	P32347	362 aa	Predicted RBP	4.61	□□□□□ -1.67
TRI1	YMR233W	CAB3	P36076	571 aa		4.61	□□□□□ -1.67
TRI1	YMR233W	CTP1	P38152	299 aa		4.61	□□□□□ -1.67
TRI1	YMR233W	CBR1	P38626	284 aa	Known RBP	4.61	□□□□□ -1.67
TRI1	YMR233W	PRM2	P40534	656 aa		4.61	□□□□□ -1.67
TRI1	YMR233W	ENP2	P48234	707 aa	Known RBP	4.61	□□□□□ -1.67
TRI1	YMR233W	FOL1	P53848	824 aa		4.61	□□□□□ -1.67
TRI1	YMR233W	ATG4	P53867	494 aa		4.61	□□□□□ -1.67
TRI1	YMR233W	TAF3	Q12297	353 aa		4.61	□□□□□ -1.67
TRI1	YMR233W	COX11	P19516	300 aa	Known RBP	4.6	□□□□□ -1.67
TRI1	YMR233W	PLC1	P32383	869 aa		4.6	□□□□□ -1.67
TRI1	YMR233W	CDS1	P38221	457 aa		4.6	□□□□□ -1.67
TRI1	YMR233W	ARG2	P40360	574 aa		4.6	□□□□□ -1.67
TRI1	YMR233W	UBA2	P52488	636 aa		4.6	□□□□□ -1.67
TRI1	YMR233W	HLR1	Q04429	423 aa		4.6	□□□□□ -1.67
TRI1	YMR233W	IRC10	Q08118	586 aa		4.6	□□□□□ -1.67
TRI1	YMR233W	MRH1	Q12117	320 aa	Predicted RBP	4.6	□□□□□ -1.67
TRI1	YMR233W	SEC15	P22224	910 aa		4.59	□□□□□ -1.67
TRI1	YMR233W	EBP2	P36049	427 aa	Known RBP	4.59	□□□□□ -1.67
TRI1	YMR233W	BDH2	P39713	417 aa		4.59	□□□□□ -1.67
TRI1	YMR233W	KHA1	P40309	873 aa		4.59	□□□□□ -1.67
TRI1	YMR233W	QRI1	P43123	477 aa	Known RBP	4.59	□□□□□ -1.67
TRI1	YMR233W	IRC5	P43610	853 aa		4.59	□□□□□ -1.67
TRI1	YMR233W	PEX14	P53112	341 aa		4.59	□□□□□ -1.67
TRI1	YMR233W	FDC1	Q03034	503 aa		4.59	□□□□□ -1.67
TRI1	YMR233W	IZH3	Q07959	543 aa		4.59	□□□□□ -1.67
TRI1	YMR233W	NGL1	Q08213	363 aa	Known RBP	4.59	□□□□□ -1.67
TRI1	YMR233W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
TRI1	YMR233W	TUP1	P16649	713 aa		4.58	□□□□□ -1.68
TRI1	YMR233W	TFC4	P33339	1025 aa		4.58	□□□□□ -1.68
TRI1	YMR233W	SRP68	P38687	599 aa	Known RBP	4.58	□□□□□ -1.68
TRI1	YMR233W	YHR097C	P38809	366 aa	Known RBP	4.58	□□□□□ -1.68
TRI1	YMR233W	CRG1	P38892	291 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms