RNA–Protein interactions for RNA: YLR187W

SKG3, Transcript of Protein of unknown function, yeast

Gene SKG3, Length 3,081 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG3	YLR187W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SKG3	YLR187W	THS1	P04801	734 aa	Known RBP	4.96	□□□□□ -1.61
SKG3	YLR187W	RPL5	P26321	297 aa	Known RBP	4.96	□□□□□ -1.61
SKG3	YLR187W	FIS1	P40515	155 aa		4.96	□□□□□ -1.61
SKG3	YLR187W	ARI1	P53111	347 aa	Known RBP	4.96	□□□□□ -1.61
SKG3	YLR187W	LSO1	Q3E827	93 aa		4.96	□□□□□ -1.61
SKG3	YLR187W	FUR4	P05316	633 aa	Known RBP	4.96	□□□□□ -1.62
SKG3	YLR187W	RPS3	P05750	240 aa	Known RBP	4.96	□□□□□ -1.62
SKG3	YLR187W	VMA4	P22203	233 aa	Known RBP	4.96	□□□□□ -1.62
SKG3	YLR187W	YME2	P32843	850 aa		4.96	□□□□□ -1.62
SKG3	YLR187W	PGM1	P33401	570 aa	Known RBP	4.96	□□□□□ -1.62
SKG3	YLR187W	DAS1	P47005	663 aa		4.96	□□□□□ -1.62
SKG3	YLR187W	YGR111W	P53265	400 aa		4.96	□□□□□ -1.62
SKG3	YLR187W	FMN1	Q03778	218 aa		4.96	□□□□□ -1.62
SKG3	YLR187W	ERV41	Q04651	352 aa		4.96	□□□□□ -1.62
SKG3	YLR187W	YLH47	Q06493	454 aa		4.96	□□□□□ -1.62
SKG3	YLR187W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
SKG3	YLR187W	BUD14	P27637	709 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	STE13	P33894	931 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	RFC3	P38629	340 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	PFK26	P40433	827 aa	Known RBP	4.95	□□□□□ -1.62
SKG3	YLR187W	YJL045W	P47052	634 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	NOP15	P53927	220 aa	Predicted RBP	4.95	□□□□□ -1.62
SKG3	YLR187W	JIP5	Q06214	492 aa	Predicted RBP	4.95	□□□□□ -1.62
SKG3	YLR187W	BI2	P03873	423 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	BI4	P03879	638 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	CDC42	P19073	191 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	SPC97	P38863	823 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	SPC72	P39723	622 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	JJJ1	P53863	590 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	DUS4	Q06063	367 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	SLX4	Q12098	748 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	RRG1	Q12167	365 aa	Predicted RBP	4.95	□□□□□ -1.62
SKG3	YLR187W	OCA6	Q12454	224 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	TY4A-H	Q6Q5P6	413 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	BI3	Q9ZZW7	517 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	SPT2	P06843	333 aa	Predicted RBP	4.95	□□□□□ -1.62
SKG3	YLR187W	ADP1	P25371	1049 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	YJL107C	P42947	387 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	TAM41	P53230	385 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	NNF2	P53253	936 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	KIN4	Q01919	800 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	OSH6	Q02201	448 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	UFO1	Q04511	668 aa		4.95	□□□□□ -1.62
SKG3	YLR187W	FAP7	Q12055	197 aa	Predicted RBP	4.95	□□□□□ -1.62
SKG3	YLR187W	TUB2	P02557	457 aa	Known RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	CIT2	P08679	460 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	TCP1	P12612	559 aa	Known RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	RNR1	P21524	888 aa	Known RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	MCM5	P29496	775 aa	Known RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	DBF4	P32325	704 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	TGL1	P34163	548 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	FZO1	P38297	855 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	OAF1	P39720	1047 aa	Predicted RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	YMR134W	P40207	237 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	AIM21	P40563	679 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	SEC26	P41810	973 aa	Known RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	CLA4	P48562	842 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	CTR1	P49573	406 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	TAF6	P53040	516 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	ZIP2	P53061	704 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	SOL4	P53315	255 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	SLT2	Q00772	484 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	GUD1	Q07729	489 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SKG3	YLR187W	NOT5	Q12514	560 aa	Predicted RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	CHS2	P14180	963 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	SNA3	P14359	133 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	TMT1	P32643	299 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	PPG1	P32838	368 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	DUG2	P38149	878 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	KEL1	P38853	1164 aa	Known RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	RSM26	P47141	266 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	CNM67	P53865	581 aa	Known RBP	4.94	□□□□□ -1.62
SKG3	YLR187W	PHM6	Q05637	104 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	YPT6	Q99260	215 aa		4.94	□□□□□ -1.62
SKG3	YLR187W	CDC33	P07260	213 aa	Known RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	GCD2	P12754	651 aa	Predicted RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	SPO16	P17122	198 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	RPC37	P36121	282 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	YBL028C	P38202	106 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	MGE1	P38523	228 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	PAC1	P39946	494 aa	Known RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	SUM1	P46676	1062 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	PGK1	P00560	416 aa	Known RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	PHO4	P07270	312 aa	Known RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	AEP2	P22136	580 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	CLB4	P24871	460 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	SPS22	P25380	463 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	RAD51	P25454	400 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	IXR1	P33417	597 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	UBP13	P38187	747 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	LIN1	P38852	340 aa	Predicted RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	ALA1	P40825	983 aa	Known RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	PAN2	P53010	1115 aa	Predicted RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	PTA1	Q01329	785 aa	Predicted RBP	4.93	□□□□□ -1.62
SKG3	YLR187W	YMR027W	Q04371	470 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	LAP2	Q10740	671 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	GPM3	Q12326	303 aa		4.93	□□□□□ -1.62
SKG3	YLR187W	TUB3	P09734	445 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms