RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI3	YJL176C	SYH1	Q02875	849 aa	Known RBP	4.9	□□□□□ -1.63
SWI3	YJL176C	YDR222W	Q04925	415 aa		4.9	□□□□□ -1.63
SWI3	YJL176C	FMP25	Q08023	583 aa		4.9	□□□□□ -1.63
SWI3	YJL176C	RCL1	Q08096	367 aa	Predicted RBP	4.9	□□□□□ -1.63
SWI3	YJL176C	DIS3	Q08162	1001 aa	Known RBP	4.9	□□□□□ -1.63
SWI3	YJL176C	RAD59	Q12223	238 aa		4.9	□□□□□ -1.63
SWI3	YJL176C	RGR1	P19263	1082 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	SIS1	P25294	352 aa	Known RBP	4.89	□□□□□ -1.63
SWI3	YJL176C	RRP43	P25359	394 aa	Predicted RBP	4.89	□□□□□ -1.63
SWI3	YJL176C	RAD16	P31244	790 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	DSS4	P32601	143 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	ABZ1	P37254	787 aa	Predicted RBP	4.89	□□□□□ -1.63
SWI3	YJL176C	FHL1	P39521	936 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	YMR124W	P39523	943 aa	Known RBP	4.89	□□□□□ -1.63
SWI3	YJL176C	CDC1	P40986	491 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	ASG7	P46993	209 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	VTC4	P47075	721 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	YGR021W	P53212	290 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	CTR9	P89105	1077 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	LEE1	Q02799	301 aa	Known RBP	4.89	□□□□□ -1.63
SWI3	YJL176C	GCN5	Q03330	439 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	ERV41	Q04651	352 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	YDR344C	Q05510	147 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	ECM22	Q05958	814 aa	Predicted RBP	4.89	□□□□□ -1.63
SWI3	YJL176C	BI2	P03873	423 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	BI4	P03879	638 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	MTF1	P14908	341 aa	Known RBP	4.89	□□□□□ -1.63
SWI3	YJL176C	CYC8	P14922	966 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	BCH2	P36122	765 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	AVT2	P39981	480 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	SNZ3	P43545	298 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	STU2	P46675	888 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	SNZ2	P53824	298 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	YPL062W	Q02781	134 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	YMR018W	Q04364	514 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	TAF9	Q05027	157 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	SAM3	Q08986	587 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	NDJ1	Q12366	352 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	EMP46	Q12396	444 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	BI3	Q9ZZW7	517 aa		4.89	□□□□□ -1.63
SWI3	YJL176C	PUT4	P15380	627 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	KAR3	P17119	729 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	BET2	P20133	325 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	IMG2	P25642	146 aa	Predicted RBP	4.88	□□□□□ -1.63
SWI3	YJL176C	DAL1	P32375	460 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	SRB2	P34162	210 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	YBR225W	P38321	900 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	SSP1	P38871	571 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	OSW7	P43611	510 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
SWI3	YJL176C	YNR014W	P53719	212 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	JJJ1	P53863	590 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	ALF1	P53904	254 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	HRD3	Q05787	833 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	AIM39	Q08223	395 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	YOR059C	Q08448	450 aa	Known RBP	4.88	□□□□□ -1.63
SWI3	YJL176C	YPQ1	Q12010	308 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	DAS2	Q12084	232 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	KEX2	P13134	814 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	SEC23	P15303	768 aa	Known RBP	4.88	□□□□□ -1.63
SWI3	YJL176C	EST1	P17214	699 aa	Predicted RBP	4.88	□□□□□ -1.63
SWI3	YJL176C	SEC1	P30619	724 aa	Known RBP	4.88	□□□□□ -1.63
SWI3	YJL176C	COY1	P34237	679 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	DUG2	P38149	878 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	NCL1	P38205	684 aa	Known RBP	4.88	□□□□□ -1.63
SWI3	YJL176C	SET5	P38890	526 aa	Known RBP	4.88	□□□□□ -1.63
SWI3	YJL176C	NUP60	P39705	539 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	SXM1	Q04175	944 aa	Known RBP	4.88	□□□□□ -1.63
SWI3	YJL176C	CIR2	Q08822	631 aa		4.88	□□□□□ -1.63
SWI3	YJL176C	PPZ1	P26570	692 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	ABD1	P32783	436 aa	Predicted RBP	4.87	□□□□□ -1.63
SWI3	YJL176C	HSP78	P33416	811 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	BLI1	P35727	113 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	PCH2	P38126	564 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	YBR053C	P38235	358 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	HSL7	P38274	827 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	SPC72	P39723	622 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	PML39	Q03760	334 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	BSP1	Q06604	576 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	THI20	Q08224	551 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	VPS5	Q92331	675 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	RAM1	P22007	431 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	RAD57	P25301	460 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	HXT1	P32465	570 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	ISF1	P32488	338 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	MFT1	P33441	392 aa	Known RBP	4.87	□□□□□ -1.63
SWI3	YJL176C	SEG2	P34250	1132 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	SAP185	P40856	1058 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	GYL1	Q04322	720 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	YRR1	Q12172	810 aa		4.87	□□□□□ -1.63
SWI3	YJL176C	ADE3	P07245	946 aa	Known RBP	4.86	□□□□□ -1.63
SWI3	YJL176C	GFA1	P14742	717 aa	Known RBP	4.86	□□□□□ -1.63
SWI3	YJL176C	STE11	P23561	717 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	PUP3	P25451	205 aa	Known RBP	4.86	□□□□□ -1.63
SWI3	YJL176C	DBF4	P32325	704 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	ECM13	P38195	257 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	LYS9	P38999	446 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	TMN3	P40071	706 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	YER189W	P40104	122 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	ATG16	Q03818	150 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms