RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	HCA4	P20448	770 aa	Known RBP	3.83	□□□□□ -1.8
NDC80	YIL144W	ELM1	P32801	640 aa		3.83	□□□□□ -1.8
NDC80	YIL144W	FAF1	P40546	346 aa	Predicted RBP	3.83	□□□□□ -1.8
NDC80	YIL144W	NOP9	P47077	666 aa	Known RBP	3.83	□□□□□ -1.8
NDC80	YIL144W	MTL1	P53214	551 aa		3.83	□□□□□ -1.8
NDC80	YIL144W	MDM1	Q01846	1127 aa		3.83	□□□□□ -1.8
NDC80	YIL144W	GIS1	Q03833	894 aa		3.83	□□□□□ -1.8
NDC80	YIL144W	VHS3	Q08438	674 aa		3.83	□□□□□ -1.8
NDC80	YIL144W	CWC2	Q12046	339 aa	Predicted RBP	3.83	□□□□□ -1.8
NDC80	YIL144W	FRS1	P15624	595 aa	Known RBP	3.82	□□□□□ -1.8
NDC80	YIL144W	YEF3	P16521	1044 aa	Known RBP	3.82	□□□□□ -1.8
NDC80	YIL144W	CAD1	P24813	409 aa	Known RBP	3.82	□□□□□ -1.8
NDC80	YIL144W	YKL222C	P35995	705 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	YKR075C	P36155	307 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	ECM1	P39715	212 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	FKH2	P41813	862 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	RNR4	P49723	345 aa	Known RBP	3.82	□□□□□ -1.8
NDC80	YIL144W	YBP2	P53169	641 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	MOT3	P54785	490 aa	Known RBP	3.82	□□□□□ -1.8
NDC80	YIL144W	MCM21	Q06675	368 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	DCG1	P32460	244 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	MTC7	P32633	139 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	KTR4	P38131	464 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	CDS1	P38221	457 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	YBR053C	P38235	358 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	YHL041W	P38730	149 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	EMP65	P40085	556 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	REC102	Q02721	264 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	NRG1	Q03125	231 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	RTK1	Q12100	620 aa	Predicted RBP	3.82	□□□□□ -1.8
NDC80	YIL144W	RRI2	Q12348	645 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	ECM3	Q99252	613 aa		3.82	□□□□□ -1.8
NDC80	YIL144W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
NDC80	YIL144W	HOP1	P20050	605 aa		3.81	□□□□□ -1.8
NDC80	YIL144W	PET127	P32606	800 aa		3.81	□□□□□ -1.8
NDC80	YIL144W	HIS6	P40545	261 aa		3.81	□□□□□ -1.8
NDC80	YIL144W	BAP3	P41815	604 aa		3.81	□□□□□ -1.8
NDC80	YIL144W	BIT61	P47041	543 aa		3.81	□□□□□ -1.8
NDC80	YIL144W	CNM67	P53865	581 aa	Known RBP	3.81	□□□□□ -1.8
NDC80	YIL144W	ENB1	Q08299	606 aa		3.81	□□□□□ -1.8
NDC80	YIL144W	FOB1	O13329	566 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	TRP4	P07285	380 aa	Predicted RBP	3.8	□□□□□ -1.8
NDC80	YIL144W	PTP2	P29461	750 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	PRE4	P30657	266 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	SRP68	P38687	599 aa	Known RBP	3.8	□□□□□ -1.8
NDC80	YIL144W	MAD2	P40958	196 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	QRI7	P43122	407 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	PHO23	P50947	330 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	YEL076C-A	P0CX16	216 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	YLR464W	P0CX17	216 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	PGI1	P12709	554 aa	Known RBP	3.8	□□□□□ -1.8
NDC80	YIL144W	NGG1	P32494	702 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	YEL076C	P39971	216 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	YIL092W	P40497	633 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	BFA1	P47113	574 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	PUS4	P48567	403 aa	Known RBP	3.8	□□□□□ -1.8
NDC80	YIL144W	MCM6	P53091	1017 aa	Known RBP	3.8	□□□□□ -1.8
NDC80	YIL144W	PRP43	P53131	767 aa	Known RBP	3.8	□□□□□ -1.8
NDC80	YIL144W	UBX4	P54730	416 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	MTD1	Q02046	320 aa	Known RBP	3.8	□□□□□ -1.8
NDC80	YIL144W	MLC2	Q06580	163 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	DIN7	Q12086	430 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	RRP6	Q12149	733 aa	Known RBP	3.8	□□□□□ -1.8
NDC80	YIL144W	YOL114C	Q12322	202 aa		3.8	□□□□□ -1.8
NDC80	YIL144W	HSC82	P15108	705 aa	Known RBP	3.79	□□□□□ -1.8
NDC80	YIL144W	PFK1	P16861	987 aa	Known RBP	3.79	□□□□□ -1.8
NDC80	YIL144W	TRZ1	P36159	838 aa	Predicted RBP	3.79	□□□□□ -1.8
NDC80	YIL144W	FMO1	P38866	432 aa		3.79	□□□□□ -1.8
NDC80	YIL144W	DUN1	P39009	513 aa		3.79	□□□□□ -1.8
NDC80	YIL144W	STE11	P23561	717 aa		3.79	□□□□□ -1.8
NDC80	YIL144W	YDL183C	P48569	320 aa		3.79	□□□□□ -1.8
NDC80	YIL144W	MUP1	P50276	574 aa		3.79	□□□□□ -1.8
NDC80	YIL144W	GAD1	Q04792	585 aa		3.79	□□□□□ -1.8
NDC80	YIL144W	THI22	Q06490	572 aa		3.79	□□□□□ -1.8
NDC80	YIL144W	VPS5	Q92331	675 aa		3.79	□□□□□ -1.8
NDC80	YIL144W	YLR358C	O13565	187 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	PMA1	P05030	918 aa	Known RBP	3.78	□□□□□ -1.8
NDC80	YIL144W	SWI3	P32591	825 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	RMA1	P36001	430 aa	Known RBP	3.78	□□□□□ -1.8
NDC80	YIL144W	YKL133C	P36066	463 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	CRG1	P38892	291 aa	RIP-Chip data	3.78	□□□□□ -1.8	not detected
NDC80	YIL144W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
NDC80	YIL144W	TAF4	P50105	388 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	MNN10	P50108	393 aa	Known RBP	3.78	□□□□□ -1.8
NDC80	YIL144W	MNT2	P53059	558 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	COX18	P53239	316 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	CIA1	Q05583	330 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	NUR1	Q12066	484 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	RTP1	Q12751	981 aa		3.78	□□□□□ -1.8
NDC80	YIL144W	ADH4	P10127	382 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	LAT1	P12695	482 aa	Known RBP	3.77	□□□□□ -1.81
NDC80	YIL144W	PEX1	P24004	1043 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	DGR2	P32330	852 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	MUM2	P38236	366 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	STL1	P39932	569 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	UBP5	P39944	805 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	PXA1	P41909	870 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	SGO1	Q08490	590 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	INH1	P01097	85 aa		3.77	□□□□□ -1.81
NDC80	YIL144W	MSS1	P32559	526 aa	Predicted RBP	3.77	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms