RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C TAD3Q9URQ3 322 aa5.05□□□□□ -1.6
CUP1-2YHR055C SWI6P09959 803 aa5.04□□□□□ -1.6
CUP1-2YHR055C THR1P17423 357 aaKnown RBP5.04□□□□□ -1.6
CUP1-2YHR055C SEC65P29478 273 aa5.04□□□□□ -1.6
CUP1-2YHR055C OAF1P39720 1047 aaPredicted RBP5.04□□□□□ -1.6
CUP1-2YHR055C BIT61P47041 543 aa5.04□□□□□ -1.6
CUP1-2YHR055C ECM9Q02202 377 aa5.04□□□□□ -1.6
CUP1-2YHR055C RGC1Q06108 1083 aaKnown RBP5.04□□□□□ -1.6
CUP1-2YHR055C CHS5Q12114 671 aaKnown RBP5.04□□□□□ -1.6
CUP1-2YHR055C FEN2P25621 512 aaKnown RBP5.03□□□□□ -1.6
CUP1-2YHR055C NTH1P32356 751 aa5.03□□□□□ -1.6
CUP1-2YHR055C DUN1P39009 513 aa5.03□□□□□ -1.6
CUP1-2YHR055C YIL077CP40508 320 aa5.03□□□□□ -1.6
CUP1-2YHR055C GPP1P41277 250 aaKnown RBP5.03□□□□□ -1.6
CUP1-2YHR055C PXA1P41909 870 aa5.03□□□□□ -1.6
CUP1-2YHR055C GPG1P53130 126 aa5.03□□□□□ -1.6
CUP1-2YHR055C PPN1Q04119 674 aa5.03□□□□□ -1.6
CUP1-2YHR055C RPS21BQ3E754 87 aaKnown RBP5.03□□□□□ -1.6
CUP1-2YHR055C RPS17AP02407 136 aaKnown RBP5.02□□□□□ -1.61
CUP1-2YHR055C RPS17BP14127 136 aaKnown RBP5.02□□□□□ -1.61
CUP1-2YHR055C TDP1P38319 544 aa5.02□□□□□ -1.61
CUP1-2YHR055C BDH2P39713 417 aa5.02□□□□□ -1.61
CUP1-2YHR055C VPS73P53142 486 aaKnown RBP5.02□□□□□ -1.61
CUP1-2YHR055C NOP15P53927 220 aaPredicted RBP5.02□□□□□ -1.61
CUP1-2YHR055C SEC6P32844 805 aa5.01□□□□□ -1.61
CUP1-2YHR055C OAF3P36023 863 aa5.01□□□□□ -1.61
CUP1-2YHR055C COS111P38308 924 aa5.01□□□□□ -1.61
CUP1-2YHR055C HXT6P39003 570 aaKnown RBP5.01□□□□□ -1.61
CUP1-2YHR055C HXT7P39004 570 aa5.01□□□□□ -1.61
CUP1-2YHR055C RFX1P48743 811 aa5.01□□□□□ -1.61
CUP1-2YHR055C YGR151CP53287 111 aa5.01□□□□□ -1.61
CUP1-2YHR055C YPS7Q06325 596 aa5.01□□□□□ -1.61
CUP1-2YHR055C HFI1Q12060 488 aa5.01□□□□□ -1.61
CUP1-2YHR055C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
CUP1-2YHR055C TAF3Q12297 353 aa5.01□□□□□ -1.61
CUP1-2YHR055C YPT7P32939 208 aa5□□□□□ -1.61
CUP1-2YHR055C UBP12P39538 1254 aa5□□□□□ -1.61
CUP1-2YHR055C MPS3P47069 682 aa5□□□□□ -1.61
CUP1-2YHR055C SPO1P53541 631 aa5□□□□□ -1.61
CUP1-2YHR055C RCR2Q03446 210 aaKnown RBP5□□□□□ -1.61
CUP1-2YHR055C YFT2Q06676 274 aa5□□□□□ -1.61
CUP1-2YHR055C YDL086WQ07505 273 aa5□□□□□ -1.61
CUP1-2YHR055C APM4Q99186 491 aa5□□□□□ -1.61
CUP1-2YHR055C FUB1P25659 250 aa4.99□□□□□ -1.61
CUP1-2YHR055C GMH1P36125 273 aa4.99□□□□□ -1.61
CUP1-2YHR055C CTP1P38152 299 aa4.99□□□□□ -1.61
CUP1-2YHR055C YEN1P40028 759 aa4.99□□□□□ -1.61
CUP1-2YHR055C YIL166CP40445 542 aa4.99□□□□□ -1.61
CUP1-2YHR055C CCT7P42943 550 aaKnown RBP4.99□□□□□ -1.61
CUP1-2YHR055C YSH1Q06224 779 aaPredicted RBP4.99□□□□□ -1.61
CUP1-2YHR055C GLN4P13188 809 aaKnown RBP4.98□□□□□ -1.61
CUP1-2YHR055C IME1P21190 360 aa4.98□□□□□ -1.61
CUP1-2YHR055C KCC4P25389 1037 aa4.98□□□□□ -1.61
CUP1-2YHR055C SET3P36124 751 aa4.98□□□□□ -1.61
CUP1-2YHR055C APL3P38065 1025 aa4.98□□□□□ -1.61
CUP1-2YHR055C BUD8P41698 603 aa4.98□□□□□ -1.61
CUP1-2YHR055C TAH11P47112 604 aa4.98□□□□□ -1.61
CUP1-2YHR055C ENP2P48234 707 aaKnown RBP4.98□□□□□ -1.61
CUP1-2YHR055C TAF4P50105 388 aa4.98□□□□□ -1.61
CUP1-2YHR055C STP4Q07351 490 aa4.98□□□□□ -1.61
CUP1-2YHR055C RPS21AP0C0V8 87 aaKnown RBP4.97□□□□□ -1.61
CUP1-2YHR055C KSP1P38691 1029 aaKnown RBP4.97□□□□□ -1.61
CUP1-2YHR055C KHA1P40309 873 aa4.97□□□□□ -1.61
CUP1-2YHR055C RNR4P49723 345 aaKnown RBP4.97□□□□□ -1.61
CUP1-2YHR055C SPC98P53540 846 aa4.97□□□□□ -1.61
CUP1-2YHR055C NSE5Q03718 556 aa4.97□□□□□ -1.61
CUP1-2YHR055C RMP1Q12530 201 aa4.97□□□□□ -1.61
CUP1-2YHR055C RPN13O13563 156 aa4.96□□□□□ -1.62
CUP1-2YHR055C SPO11P23179 398 aa4.96□□□□□ -1.62
CUP1-2YHR055C FAT1P38225 669 aa4.96□□□□□ -1.62
CUP1-2YHR055C YHR097CP38809 366 aaKnown RBP4.96□□□□□ -1.62
CUP1-2YHR055C VID28P40547 921 aa4.96□□□□□ -1.62
CUP1-2YHR055C IES1P43579 692 aa4.96□□□□□ -1.62
CUP1-2YHR055C DUG1P43616 481 aaKnown RBP4.96□□□□□ -1.62
CUP1-2YHR055C APM1Q00776 475 aaPredicted RBP4.96□□□□□ -1.62
CUP1-2YHR055C TRE2Q08693 809 aa4.96□□□□□ -1.62
CUP1-2YHR055C BMS1Q08965 1183 aaKnown RBP4.96□□□□□ -1.62
CUP1-2YHR055C TSR4P25040 408 aa4.95□□□□□ -1.62
CUP1-2YHR055C DGR2P32330 852 aa4.95□□□□□ -1.62
CUP1-2YHR055C GRX4P32642 244 aa4.95□□□□□ -1.62
CUP1-2YHR055C PPZ2P33329 710 aa4.95□□□□□ -1.62
CUP1-2YHR055C UBS1P38290 277 aa4.95□□□□□ -1.62
CUP1-2YHR055C NMA2P53204 395 aa4.95□□□□□ -1.62
CUP1-2YHR055C YHR033WP38690 423 aa4.94□□□□□ -1.62
CUP1-2YHR055C DIP5P53388 608 aa4.94□□□□□ -1.62
CUP1-2YHR055C YPR027CQ12079 277 aa4.94□□□□□ -1.62
CUP1-2YHR055C SUT2Q12286 268 aa4.94□□□□□ -1.62
CUP1-2YHR055C ACO1P19414 778 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
CUP1-2YHR055C AEP2P22136 580 aa4.93□□□□□ -1.62
CUP1-2YHR055C ILV6P25605 309 aaKnown RBP4.93□□□□□ -1.62
CUP1-2YHR055C PRE4P30657 266 aa4.93□□□□□ -1.62
CUP1-2YHR055C MSS1P32559 526 aaPredicted RBP4.93□□□□□ -1.62
CUP1-2YHR055C FDC1Q03034 503 aa4.93□□□□□ -1.62
CUP1-2YHR055C SKY1Q03656 742 aa4.93□□□□□ -1.62
CUP1-2YHR055C UFO1Q04511 668 aa4.93□□□□□ -1.62
CUP1-2YHR055C IZH3Q07959 543 aa4.93□□□□□ -1.62
CUP1-2YHR055C RKI1Q12189 258 aa4.93□□□□□ -1.62
CUP1-2YHR055C LAM4P38800 1345 aa4.93□□□□□ -1.62
CUP1-2YHR055C EUG1P32474 517 aa4.92□□□□□ -1.62
CUP1-2YHR055C ELF1P36053 145 aa4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms