RNA–Protein interactions for RNA: YHR051W

COX6, Transcript of Subunit VI of cytochrome c oxidase (Complex IV), yeast

Gene COX6, Length 447 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COX6	YHR051W	YHM2	Q04013	314 aa		4.68	□□□□□ -1.66
COX6	YHR051W	VBA4	Q04602	768 aa	Known RBP	4.68	□□□□□ -1.66
COX6	YHR051W	YPS7	Q06325	596 aa		4.68	□□□□□ -1.66
COX6	YHR051W	TAD3	Q9URQ3	322 aa		4.68	□□□□□ -1.66
COX6	YHR051W	SEC15	P22224	910 aa		4.67	□□□□□ -1.66
COX6	YHR051W	FEN2	P25621	512 aa	Known RBP	4.67	□□□□□ -1.66
COX6	YHR051W	SEC65	P29478	273 aa		4.67	□□□□□ -1.66
COX6	YHR051W	OAF3	P36023	863 aa		4.67	□□□□□ -1.66
COX6	YHR051W	YJL206C	P39529	758 aa		4.67	□□□□□ -1.66
COX6	YHR051W	NOP15	P53927	220 aa	Predicted RBP	4.67	□□□□□ -1.66
COX6	YHR051W	RCR2	Q03446	210 aa	Known RBP	4.67	□□□□□ -1.66
COX6	YHR051W	HFI1	Q12060	488 aa		4.67	□□□□□ -1.66
COX6	YHR051W	CHS5	Q12114	671 aa	Known RBP	4.67	□□□□□ -1.66
COX6	YHR051W	USV1	Q12132	391 aa		4.67	□□□□□ -1.66
COX6	YHR051W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
COX6	YHR051W	APM4	Q99186	491 aa		4.67	□□□□□ -1.66
COX6	YHR051W	RPS17A	P02407	136 aa	Known RBP	4.66	□□□□□ -1.66
COX6	YHR051W	RPS9B	P05755	195 aa	Known RBP	4.66	□□□□□ -1.66
COX6	YHR051W	RPS17B	P14127	136 aa	Known RBP	4.66	□□□□□ -1.66
COX6	YHR051W	IME1	P21190	360 aa		4.66	□□□□□ -1.66
COX6	YHR051W	GLG1	P36143	616 aa		4.66	□□□□□ -1.66
COX6	YHR051W	YIL077C	P40508	320 aa		4.66	□□□□□ -1.66
COX6	YHR051W	CTR1	P49573	406 aa		4.66	□□□□□ -1.66
COX6	YHR051W	PTA1	Q01329	785 aa	Predicted RBP	4.66	□□□□□ -1.66
COX6	YHR051W	TAF3	Q12297	353 aa		4.66	□□□□□ -1.66
COX6	YHR051W	ABF1	P14164	731 aa		4.65	□□□□□ -1.67
COX6	YHR051W	GFA1	P14742	717 aa	Known RBP	4.65	□□□□□ -1.67
COX6	YHR051W	PRP22	P24384	1145 aa	Known RBP	4.65	□□□□□ -1.67
COX6	YHR051W	DMC1	P25453	334 aa		4.65	□□□□□ -1.67
COX6	YHR051W	UBS1	P38290	277 aa		4.65	□□□□□ -1.67
COX6	YHR051W	COS111	P38308	924 aa		4.65	□□□□□ -1.67
COX6	YHR051W	BDH2	P39713	417 aa		4.65	□□□□□ -1.67
COX6	YHR051W	CCT7	P42943	550 aa	Known RBP	4.65	□□□□□ -1.67
COX6	YHR051W	RFX1	P48743	811 aa		4.65	□□□□□ -1.67
COX6	YHR051W	VPS73	P53142	486 aa	Known RBP	4.65	□□□□□ -1.67
COX6	YHR051W	STP4	Q07351	490 aa		4.65	□□□□□ -1.67
COX6	YHR051W	RPS21A	P0C0V8	87 aa	Known RBP	4.64	□□□□□ -1.67
COX6	YHR051W	SET3	P36124	751 aa		4.64	□□□□□ -1.67
COX6	YHR051W	TDP1	P38319	544 aa		4.64	□□□□□ -1.67
COX6	YHR051W	DUN1	P39009	513 aa		4.64	□□□□□ -1.67
COX6	YHR051W	YEN1	P40028	759 aa		4.64	□□□□□ -1.67
COX6	YHR051W	BUD8	P41698	603 aa		4.64	□□□□□ -1.67
COX6	YHR051W	PXA1	P41909	870 aa		4.64	□□□□□ -1.67
COX6	YHR051W	MPS3	P47069	682 aa		4.64	□□□□□ -1.67
COX6	YHR051W	PPN1	Q04119	674 aa		4.64	□□□□□ -1.67
COX6	YHR051W	YFT2	Q06676	274 aa		4.64	□□□□□ -1.67
COX6	YHR051W	HCA4	P20448	770 aa	Known RBP	4.63	□□□□□ -1.67
COX6	YHR051W	NTH1	P32356	751 aa		4.63	□□□□□ -1.67
COX6	YHR051W	GRX4	P32642	244 aa		4.63	□□□□□ -1.67
COX6	YHR051W	FAT1	P38225	669 aa		4.63	□□□□□ -1.67
COX6	YHR051W	IES1	P43579	692 aa		4.63	□□□□□ -1.67
COX6	YHR051W	YGR151C	P53287	111 aa		4.63	□□□□□ -1.67
COX6	YHR051W	SPO1	P53541	631 aa		4.63	□□□□□ -1.67
COX6	YHR051W	GLN4	P13188	809 aa	Known RBP	4.62	□□□□□ -1.67
COX6	YHR051W	FUB1	P25659	250 aa		4.62	□□□□□ -1.67
COX6	YHR051W	CTP1	P38152	299 aa		4.62	□□□□□ -1.67
COX6	YHR051W	KHA1	P40309	873 aa		4.62	□□□□□ -1.67
COX6	YHR051W	VID28	P40547	921 aa		4.62	□□□□□ -1.67
COX6	YHR051W	TAH11	P47112	604 aa		4.62	□□□□□ -1.67
COX6	YHR051W	NSE5	Q03718	556 aa		4.62	□□□□□ -1.67
COX6	YHR051W	YDL086W	Q07505	273 aa		4.62	□□□□□ -1.67
COX6	YHR051W	SUT2	Q12286	268 aa		4.62	□□□□□ -1.67
COX6	YHR051W	MSS1	P32559	526 aa	Predicted RBP	4.61	□□□□□ -1.67
COX6	YHR051W	YHR097C	P38809	366 aa	Known RBP	4.61	□□□□□ -1.67
COX6	YHR051W	DUG1	P43616	481 aa	Known RBP	4.61	□□□□□ -1.67
COX6	YHR051W	TAF4	P50105	388 aa		4.61	□□□□□ -1.67
COX6	YHR051W	YSH1	Q06224	779 aa	Predicted RBP	4.61	□□□□□ -1.67
COX6	YHR051W	KCC4	P25389	1037 aa		4.6	□□□□□ -1.67
COX6	YHR051W	GMH1	P36125	273 aa		4.6	□□□□□ -1.67
COX6	YHR051W	BMS1	Q08965	1183 aa	Known RBP	4.6	□□□□□ -1.67
COX6	YHR051W	RMP1	Q12530	201 aa		4.6	□□□□□ -1.67
COX6	YHR051W	CDC26	P14724	124 aa		4.59	□□□□□ -1.67
COX6	YHR051W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
COX6	YHR051W	TSR4	P25040	408 aa		4.59	□□□□□ -1.67
COX6	YHR051W	PRE4	P30657	266 aa		4.59	□□□□□ -1.67
COX6	YHR051W	DAL3	P32459	195 aa		4.59	□□□□□ -1.67
COX6	YHR051W	EUG1	P32474	517 aa		4.59	□□□□□ -1.67
COX6	YHR051W	KSP1	P38691	1029 aa	Known RBP	4.59	□□□□□ -1.67
COX6	YHR051W	GPP2	P40106	250 aa	Known RBP	4.59	□□□□□ -1.67
COX6	YHR051W	YIL166C	P40445	542 aa		4.59	□□□□□ -1.67
COX6	YHR051W	ENP2	P48234	707 aa	Known RBP	4.59	□□□□□ -1.67
COX6	YHR051W	RNR4	P49723	345 aa	Known RBP	4.59	□□□□□ -1.67
COX6	YHR051W	MF(ALPHA)2	P32435	120 aa		4.58	□□□□□ -1.68
COX6	YHR051W	EMP70	P32802	667 aa		4.58	□□□□□ -1.68
COX6	YHR051W	APL3	P38065	1025 aa		4.58	□□□□□ -1.68
COX6	YHR051W	NMA2	P53204	395 aa		4.58	□□□□□ -1.68
COX6	YHR051W	DIP5	P53388	608 aa		4.58	□□□□□ -1.68
COX6	YHR051W	FDC1	Q03034	503 aa		4.58	□□□□□ -1.68
COX6	YHR051W	IZH3	Q07959	543 aa		4.58	□□□□□ -1.68
COX6	YHR051W	TRE2	Q08693	809 aa		4.58	□□□□□ -1.68
COX6	YHR051W	YPR027C	Q12079	277 aa		4.58	□□□□□ -1.68
COX6	YHR051W	RKI1	Q12189	258 aa		4.58	□□□□□ -1.68
COX6	YHR051W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
COX6	YHR051W	AEP2	P22136	580 aa		4.57	□□□□□ -1.68
COX6	YHR051W	YHR033W	P38690	423 aa		4.57	□□□□□ -1.68
COX6	YHR051W	TMN3	P40071	706 aa		4.57	□□□□□ -1.68
COX6	YHR051W	PRM2	P40534	656 aa		4.57	□□□□□ -1.68
COX6	YHR051W	SPC98	P53540	846 aa		4.57	□□□□□ -1.68
COX6	YHR051W	APM1	Q00776	475 aa	Predicted RBP	4.57	□□□□□ -1.68
COX6	YHR051W	SKY1	Q03656	742 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms