RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	GPG1	P53130	126 aa		4.81	□□□□□ -1.64
ATP16	YDL004W	ECM9	Q02202	377 aa		4.81	□□□□□ -1.64
ATP16	YDL004W	YHM2	Q04013	314 aa		4.81	□□□□□ -1.64
ATP16	YDL004W	VBA4	Q04602	768 aa	Known RBP	4.81	□□□□□ -1.64
ATP16	YDL004W	FAP7	Q12055	197 aa	Predicted RBP	4.81	□□□□□ -1.64
ATP16	YDL004W	SWI6	P09959	803 aa		4.8	□□□□□ -1.64
ATP16	YDL004W	HCA4	P20448	770 aa	Known RBP	4.8	□□□□□ -1.64
ATP16	YDL004W	PRP28	P23394	588 aa		4.8	□□□□□ -1.64
ATP16	YDL004W	DMC1	P25453	334 aa		4.8	□□□□□ -1.64
ATP16	YDL004W	SEC65	P29478	273 aa		4.8	□□□□□ -1.64
ATP16	YDL004W	SEC6	P32844	805 aa		4.8	□□□□□ -1.64
ATP16	YDL004W	CCT5	P40413	562 aa	Known RBP	4.8	□□□□□ -1.64
ATP16	YDL004W	GPP1	P41277	250 aa	Known RBP	4.8	□□□□□ -1.64
ATP16	YDL004W	GZF3	P42944	551 aa	Known RBP	4.8	□□□□□ -1.64
ATP16	YDL004W	MPS3	P47069	682 aa		4.8	□□□□□ -1.64
ATP16	YDL004W	YTM1	Q12024	460 aa	Predicted RBP	4.8	□□□□□ -1.64
ATP16	YDL004W	TAF3	Q12297	353 aa		4.8	□□□□□ -1.64
ATP16	YDL004W	KIN82	P25341	720 aa		4.79	□□□□□ -1.64
ATP16	YDL004W	COS111	P38308	924 aa		4.79	□□□□□ -1.64
ATP16	YDL004W	YHR097C	P38809	366 aa	Known RBP	4.79	□□□□□ -1.64
ATP16	YDL004W	HXT6	P39003	570 aa	Known RBP	4.79	□□□□□ -1.64
ATP16	YDL004W	HXT7	P39004	570 aa		4.79	□□□□□ -1.64
ATP16	YDL004W	OAF1	P39720	1047 aa	Predicted RBP	4.79	□□□□□ -1.64
ATP16	YDL004W	YGR151C	P53287	111 aa		4.79	□□□□□ -1.64
ATP16	YDL004W	NOP15	P53927	220 aa	Predicted RBP	4.79	□□□□□ -1.64
ATP16	YDL004W	HFD1	Q04458	532 aa		4.79	□□□□□ -1.64
ATP16	YDL004W	YDL086W	Q07505	273 aa		4.79	□□□□□ -1.64
ATP16	YDL004W	RPS17A	P02407	136 aa	Known RBP	4.78	□□□□□ -1.64
ATP16	YDL004W	RPS21A	P0C0V8	87 aa	Known RBP	4.78	□□□□□ -1.64
ATP16	YDL004W	RPS17B	P14127	136 aa	Known RBP	4.78	□□□□□ -1.64
ATP16	YDL004W	FUB1	P25659	250 aa		4.78	□□□□□ -1.64
ATP16	YDL004W	YPT7	P32939	208 aa		4.78	□□□□□ -1.64
ATP16	YDL004W	PPZ2	P33329	710 aa		4.78	□□□□□ -1.64
ATP16	YDL004W	DUN1	P39009	513 aa		4.78	□□□□□ -1.64
ATP16	YDL004W	BDH2	P39713	417 aa		4.78	□□□□□ -1.64
ATP16	YDL004W	NMA2	P53204	395 aa		4.78	□□□□□ -1.64
ATP16	YDL004W	YFT2	Q06676	274 aa		4.78	□□□□□ -1.64
ATP16	YDL004W	GLN4	P13188	809 aa	Known RBP	4.77	□□□□□ -1.65
ATP16	YDL004W	IME1	P21190	360 aa		4.77	□□□□□ -1.65
ATP16	YDL004W	OAF3	P36023	863 aa		4.77	□□□□□ -1.65
ATP16	YDL004W	FAT1	P38225	669 aa		4.77	□□□□□ -1.65
ATP16	YDL004W	KSP1	P38691	1029 aa	Known RBP	4.77	□□□□□ -1.65
ATP16	YDL004W	BUD8	P41698	603 aa		4.77	□□□□□ -1.65
ATP16	YDL004W	PXA1	P41909	870 aa		4.77	□□□□□ -1.65
ATP16	YDL004W	MNN11	P46985	422 aa	Known RBP	4.77	□□□□□ -1.65
ATP16	YDL004W	DOS2	P54858	310 aa		4.77	□□□□□ -1.65
ATP16	YDL004W	STP4	Q07351	490 aa		4.77	□□□□□ -1.65
ATP16	YDL004W	ABF1	P14164	731 aa		4.76	□□□□□ -1.65
ATP16	YDL004W	PEX2	P32800	271 aa		4.76	□□□□□ -1.65
ATP16	YDL004W	EMP70	P32802	667 aa		4.76	□□□□□ -1.65
ATP16	YDL004W	GMH1	P36125	273 aa		4.76	□□□□□ -1.65
ATP16	YDL004W	KHA1	P40309	873 aa		4.76	□□□□□ -1.65
ATP16	YDL004W	PTA1	Q01329	785 aa	Predicted RBP	4.76	□□□□□ -1.65
ATP16	YDL004W	HFI1	Q12060	488 aa		4.76	□□□□□ -1.65
ATP16	YDL004W	PRP22	P24384	1145 aa	Known RBP	4.75	□□□□□ -1.65
ATP16	YDL004W	CTP1	P38152	299 aa		4.75	□□□□□ -1.65
ATP16	YDL004W	YIL166C	P40445	542 aa		4.75	□□□□□ -1.65
ATP16	YDL004W	SPC98	P53540	846 aa		4.75	□□□□□ -1.65
ATP16	YDL004W	GIS1	Q03833	894 aa		4.75	□□□□□ -1.65
ATP16	YDL004W	AIM44	Q99299	758 aa		4.75	□□□□□ -1.65
ATP16	YDL004W	BNR1	P40450	1375 aa		4.75	□□□□□ -1.65
ATP16	YDL004W	NTH1	P32356	751 aa		4.74	□□□□□ -1.65
ATP16	YDL004W	DAL3	P32459	195 aa		4.74	□□□□□ -1.65
ATP16	YDL004W	MSS1	P32559	526 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP16	YDL004W	DID4	P36108	232 aa		4.74	□□□□□ -1.65
ATP16	YDL004W	VID28	P40547	921 aa		4.74	□□□□□ -1.65
ATP16	YDL004W	LGE1	Q02796	332 aa	Known RBP	4.74	□□□□□ -1.65
ATP16	YDL004W	YSH1	Q06224	779 aa	Predicted RBP	4.74	□□□□□ -1.65
ATP16	YDL004W	LAM4	P38800	1345 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	SPO11	P23179	398 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	KCC4	P25389	1037 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	ELF1	P36053	145 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	RIX1	P38883	763 aa	Predicted RBP	4.73	□□□□□ -1.65
ATP16	YDL004W	UBP12	P39538	1254 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	YEN1	P40028	759 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	ATF1	P40353	525 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	TAF4	P50105	388 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	DIP5	P53388	608 aa		4.73	□□□□□ -1.65
ATP16	YDL004W	APL3	P38065	1025 aa		4.72	□□□□□ -1.65
ATP16	YDL004W	TMN3	P40071	706 aa		4.72	□□□□□ -1.65
ATP16	YDL004W	IES1	P43579	692 aa		4.72	□□□□□ -1.65
ATP16	YDL004W	SPO1	P53541	631 aa		4.72	□□□□□ -1.65
ATP16	YDL004W	APM1	Q00776	475 aa	Predicted RBP	4.72	□□□□□ -1.65
ATP16	YDL004W	PPN1	Q04119	674 aa		4.72	□□□□□ -1.65
ATP16	YDL004W	RKI1	Q12189	258 aa		4.72	□□□□□ -1.65
ATP16	YDL004W	TUB1	P09733	447 aa	Known RBP	4.71	□□□□□ -1.66
ATP16	YDL004W	ADY2	P25613	283 aa		4.71	□□□□□ -1.66
ATP16	YDL004W	PRE4	P30657	266 aa		4.71	□□□□□ -1.66
ATP16	YDL004W	YHR033W	P38690	423 aa		4.71	□□□□□ -1.66
ATP16	YDL004W	YEL020C	P39994	560 aa		4.71	□□□□□ -1.66
ATP16	YDL004W	TIM50	Q02776	476 aa		4.71	□□□□□ -1.66
ATP16	YDL004W	IZH3	Q07959	543 aa		4.71	□□□□□ -1.66
ATP16	YDL004W	APM4	Q99186	491 aa		4.71	□□□□□ -1.66
ATP16	YDL004W	STE12	P13574	688 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	CDC26	P14724	124 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	TUP1	P16649	713 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	CUE2	P36075	443 aa	Known RBP	4.7	□□□□□ -1.66
ATP16	YDL004W	FLO10	P36170	1169 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	MUP3	P38734	546 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	MIT1	P40002	666 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms