RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W TDA9Q04545 1251 aa3.29□□□□□ -1.88
SWD3YBR175W GSF2Q04697 403 aaKnown RBP3.29□□□□□ -1.88
SWD3YBR175W MCH5Q08777 521 aa3.29□□□□□ -1.88
SWD3YBR175W HSH49Q99181 213 aaPredicted RBP3.29□□□□□ -1.88
SWD3YBR175W YLR149CQ99296 730 aa3.29□□□□□ -1.88
SWD3YBR175W RPS9AO13516 197 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W CYC1P00044 109 aaPredicted RBP3.28□□□□□ -1.88
SWD3YBR175W HSP82P02829 709 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W RPS13P05756 151 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W SNF1P06782 633 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W NUC1P08466 329 aa3.28□□□□□ -1.88
SWD3YBR175W SWI6P09959 803 aa3.28□□□□□ -1.88
SWD3YBR175W ADH4P10127 382 aa3.28□□□□□ -1.88
SWD3YBR175W MTF2P10849 440 aa3.28□□□□□ -1.88
SWD3YBR175W GLN4P13188 809 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W GUK1P15454 187 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W MET8P15807 274 aa3.28□□□□□ -1.88
SWD3YBR175W NCP1P16603 691 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W FUR1P18562 216 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W CMK1P27466 446 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W HXT4P32467 576 aa3.28□□□□□ -1.88
SWD3YBR175W ECM32P32644 1121 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W RPT3P33298 428 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W TGL1P34163 548 aa3.28□□□□□ -1.88
SWD3YBR175W PXA2P34230 853 aa3.28□□□□□ -1.88
SWD3YBR175W YKR018CP36114 725 aa3.28□□□□□ -1.88
SWD3YBR175W NOP4P37838 685 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W STL1P39932 569 aa3.28□□□□□ -1.88
SWD3YBR175W SCS2P40075 244 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W RIC1P40395 1056 aa3.28□□□□□ -1.88
SWD3YBR175W VID28P40547 921 aa3.28□□□□□ -1.88
SWD3YBR175W GPD2P41911 440 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W CPR6P53691 371 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W MRPL19P53875 158 aa3.28□□□□□ -1.88
SWD3YBR175W TIM10P87108 93 aa3.28□□□□□ -1.88
SWD3YBR175W MTD1Q02046 320 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W YDR132CQ03900 495 aa3.28□□□□□ -1.88
SWD3YBR175W YLR287CQ05881 355 aa3.28□□□□□ -1.88
SWD3YBR175W VID22Q05934 901 aa3.28□□□□□ -1.88
SWD3YBR175W NGL1Q08213 363 aaKnown RBP3.28□□□□□ -1.88
SWD3YBR175W YOR352WQ08816 343 aa3.28□□□□□ -1.88
SWD3YBR175W SEM1O94742 89 aa3.27□□□□□ -1.89
SWD3YBR175W PRC1P00729 532 aa3.27□□□□□ -1.89
SWD3YBR175W CDC26P14724 124 aa3.27□□□□□ -1.89
SWD3YBR175W SPO16P17122 198 aa3.27□□□□□ -1.89
SWD3YBR175W UBC1P21734 215 aaKnown RBP3.27□□□□□ -1.89
SWD3YBR175W CDC60P26637 1090 aaKnown RBP3.27□□□□□ -1.89
SWD3YBR175W RAD16P31244 790 aa3.27□□□□□ -1.89
SWD3YBR175W VPH1P32563 840 aaKnown RBP3.27□□□□□ -1.89
SWD3YBR175W SRP68P38687 599 aaKnown RBP3.27□□□□□ -1.89
SWD3YBR175W SSZ1P38788 538 aaKnown RBP3.27□□□□□ -1.89
SWD3YBR175W DUN1P39009 513 aa3.27□□□□□ -1.89
SWD3YBR175W MEF2P39677 819 aa3.27□□□□□ -1.89
SWD3YBR175W PUG1P40100 303 aa3.27□□□□□ -1.89
SWD3YBR175W IMA5P40884 581 aa3.27□□□□□ -1.89
SWD3YBR175W CEP3P40969 608 aa3.27□□□□□ -1.89
SWD3YBR175W IRC5P43610 853 aa3.27□□□□□ -1.89
SWD3YBR175W YJR039WP47107 1121 aa3.27□□□□□ -1.89
SWD3YBR175W NOP15P53927 220 aaPredicted RBP3.27□□□□□ -1.89
SWD3YBR175W ARP4P80428 489 aa3.27□□□□□ -1.89
SWD3YBR175W MSC2Q03455 724 aa3.27□□□□□ -1.89
SWD3YBR175W CLU1Q03690 1277 aaKnown RBP3.27□□□□□ -1.89
SWD3YBR175W NSE5Q03718 556 aa3.27□□□□□ -1.89
SWD3YBR175W TAF11Q04226 346 aa3.27□□□□□ -1.89
SWD3YBR175W IRC3Q06683 689 aa3.27□□□□□ -1.89
SWD3YBR175W PSR1Q07800 427 aa3.27□□□□□ -1.89
SWD3YBR175W RRG1Q12167 365 aaPredicted RBP3.27□□□□□ -1.89
SWD3YBR175W TAH18Q12181 623 aa3.27□□□□□ -1.89
SWD3YBR175W YOR022CQ12204 715 aa3.27□□□□□ -1.89
SWD3YBR175W RIB2Q12362 591 aaKnown RBP3.27□□□□□ -1.89
SWD3YBR175W SPT7P35177 1332 aa3.26□□□□□ -1.89
SWD3YBR175W PHO5P00635 467 aa3.26□□□□□ -1.89
SWD3YBR175W LEU2P04173 364 aaPredicted RBP3.26□□□□□ -1.89
SWD3YBR175W NOT3P06102 836 aaKnown RBP3.26□□□□□ -1.89
SWD3YBR175W CDC16P09798 840 aa3.26□□□□□ -1.89
SWD3YBR175W PRE10P21242 288 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SWD3YBR175W APL1P27351 700 aa3.26□□□□□ -1.89
SWD3YBR175W RPC82P32349 654 aa3.26□□□□□ -1.89
SWD3YBR175W ANP1P32629 500 aa3.26□□□□□ -1.89
SWD3YBR175W STE13P33894 931 aa3.26□□□□□ -1.89
SWD3YBR175W YKR075CP36155 307 aa3.26□□□□□ -1.89
SWD3YBR175W BEM4P39011 633 aa3.26□□□□□ -1.89
SWD3YBR175W SWD1P39706 426 aa3.26□□□□□ -1.89
SWD3YBR175W YER010CP40011 234 aa3.26□□□□□ -1.89
SWD3YBR175W IRC6P43615 237 aa3.26□□□□□ -1.89
SWD3YBR175W SAP4P53036 818 aa3.26□□□□□ -1.89
SWD3YBR175W RRT6P53117 311 aaPredicted RBP3.26□□□□□ -1.89
SWD3YBR175W CBK1P53894 756 aa3.26□□□□□ -1.89
SWD3YBR175W HDA1P53973 706 aa3.26□□□□□ -1.89
SWD3YBR175W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SWD3YBR175W GCN5Q03330 439 aa3.26□□□□□ -1.89
SWD3YBR175W SYF1Q04048 859 aaPredicted RBP3.26□□□□□ -1.89
SWD3YBR175W TFC6Q06339 672 aa3.26□□□□□ -1.89
SWD3YBR175W TRM8Q12009 286 aa3.26□□□□□ -1.89
SWD3YBR175W YLR358CO13565 187 aa3.25□□□□□ -1.89
SWD3YBR175W RPS17AP02407 136 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W GAL10P04397 699 aa3.25□□□□□ -1.89
SWD3YBR175W VAS1P07806 1104 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W YEL076C-AP0CX16 216 aa3.25□□□□□ -1.89
SWD3YBR175W YLR464WP0CX17 216 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms