RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 MBD4O95243 580 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 PLS1Q14651 629 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 TMX3Q96JJ7 454 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 THRAP3Q9Y2W1 955 aaKnown RBP12.61□□□□□ -0.39
SCN1B-208ENST00000640135 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 MAP7D2Q96T17 732 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 MYOM2P54296 1465 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-208ENST00000640135 ZSCAN22P10073 491 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-208ENST00000640135 LIG1P18858 919 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 SYKP43405 635 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 ATP7BP35670 1465 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 BEGAINQ9BUH8 593 aa12.6□□□□□ -0.39
SCN1B-208ENST00000640135 METP08581 1390 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 SYCE3A1L190 88 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 DKC1O60832 514 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCN1B-208ENST00000640135 KRT13P13646 458 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 STAT6P42226 847 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 GSDMDP57764 484 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 GRM1Q13255 1194 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 FERMT1Q9BQL6 677 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 WDR17Q8IZU2 1322 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 GIGYF1O75420 1035 aaPredicted RBP12.59□□□□□ -0.39
SCN1B-208ENST00000640135 TFIP11Q9UBB9 837 aaKnown RBP12.59□□□□□ -0.39
SCN1B-208ENST00000640135 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 CREB3L3Q68CJ9 461 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 BRAPQ7Z569 592 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 STK24Q9Y6E0 443 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 KRT2P35908 639 aa12.59□□□□□ -0.39
SCN1B-208ENST00000640135 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
SCN1B-208ENST00000640135 SIK1P57059 783 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 G2E3Q7L622 706 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 IVNS1ABPQ9Y6Y0 642 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
SCN1B-208ENST00000640135 KIF5CO60282 957 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 TDRD12Q587J7 1177 aaKnown RBP12.58□□□□□ -0.4
SCN1B-208ENST00000640135 LZTS2Q9BRK4 669 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 PNMA2Q9UL42 364 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 TRIM35Q9UPQ4 493 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 USP19O94966 1318 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 TIMM10P62072 90 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 USP48Q86UV5 1035 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 GBP3Q9H0R5 595 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 ABCA9Q8IUA7 1624 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 KDM5CP41229 1560 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 ARHGAP31Q2M1Z3 1444 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
SCN1B-208ENST00000640135 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
SCN1B-208ENST00000640135 IMPG2Q9BZV3 1241 aa12.58□□□□□ -0.4
SCN1B-208ENST00000640135 PSMA7O14818 248 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 CHMLP26374 656 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 PCCAP05165 728 aaPredicted RBP12.57□□□□□ -0.4
SCN1B-208ENST00000640135 GBP2P32456 591 aaPredicted RBP12.57□□□□□ -0.4
SCN1B-208ENST00000640135 PLEKHM2Q8IWE5 1019 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 KBTBD3Q8NAB2 608 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 IBTKQ9P2D0 1353 aaPredicted RBP12.57□□□□□ -0.4
SCN1B-208ENST00000640135 MRPS27Q92552 414 aaKnown RBP12.57□□□□□ -0.4
SCN1B-208ENST00000640135 SNX21Q969T3 373 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 GOLGA6L9A6NEM1 432 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 HS2ST1Q7LGA3 356 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 RAB11FIP4Q86YS3 637 aa12.57□□□□□ -0.4
SCN1B-208ENST00000640135 CTSWP56202 376 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 IFI16Q16666 785 aaKnown RBP12.56□□□□□ -0.4
SCN1B-208ENST00000640135 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-208ENST00000640135 ZBTB38Q8NAP3 1195 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-208ENST00000640135 BRPF3Q9ULD4 1205 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 PPP1R2P41236 205 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 PAFAH1B1P43034 410 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 RAB3GAP1Q15042 981 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 GPR162Q16538 588 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 NEURL1BA8MQ27 555 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 EZRP15311 586 aaKnown RBP12.56□□□□□ -0.4
SCN1B-208ENST00000640135 MCM3P25205 808 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 ZNF771Q7L3S4 317 aaPredicted RBP12.56□□□□□ -0.4
SCN1B-208ENST00000640135 UNC5CLQ8IV45 518 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 INTS4Q96HW7 963 aaKnown RBP12.56□□□□□ -0.4
SCN1B-208ENST00000640135 DBNDD2Q9BQY9 259 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 LRRC2Q9BYS8 371 aa12.56□□□□□ -0.4
SCN1B-208ENST00000640135 DCAF15Q66K64 600 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 FMNL3Q8IVF7 1028 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 TCHPQ9BT92 498 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 PLVAPQ9BX97 442 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 SPATA5Q8NB90 893 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 SUCLG2Q96I99 432 aa12.55□□□□□ -0.4
SCN1B-208ENST00000640135 ALS2CR12Q96Q35 445 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms