RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 SHANK3Q9BYB0 1731 aa10.49□□□□□ -0.73
PAX6-259ENST00000639916 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
PAX6-259ENST00000639916 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
PAX6-259ENST00000639916 ADAM21Q9UKJ8 722 aa10.49□□□□□ -0.73
PAX6-259ENST00000639916 PALD1Q9ULE6 856 aa10.49□□□□□ -0.73
PAX6-259ENST00000639916 LAMB4A4D0S4 1761 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 SASH3O75995 380 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 SEC31AO94979 1220 aaKnown RBP10.48□□□□□ -0.73
PAX6-259ENST00000639916 CPP00450 1065 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 CORO7P57737 925 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 UBE2HP62256 183 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 BIRC2Q13490 618 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 FOXR1Q6PIV2 292 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 CWC27Q6UX04 472 aaKnown RBP10.48□□□□□ -0.73
PAX6-259ENST00000639916 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 L2HGDHQ9H9P8 463 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 ASAP1Q9ULH1 1129 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 CNPY2Q9Y2B0 182 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 UBR2Q8IWV8 1755 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 ARFGEF2Q9Y6D5 1785 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 SGSM2O43147 1006 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 TRDNQ13061 729 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 CUL4AQ13619 759 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 SMC1AQ14683 1233 aaKnown RBP10.48□□□□□ -0.73
PAX6-259ENST00000639916 CCDC144BQ3MJ40 725 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 RABL6Q3YEC7 729 aaPredicted RBP10.48□□□□□ -0.73
PAX6-259ENST00000639916 LUZP1Q86V48 1076 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 CCDC144CPQ8IYA2 1237 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 COPRSQ9NQ92 184 aa10.48□□□□□ -0.73
PAX6-259ENST00000639916 RBM28Q9NW13 759 aaKnown RBP10.48□□□□□ -0.73
PAX6-259ENST00000639916 LTBP4Q8N2S1 1624 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 RFX5P48382 616 aaPredicted RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 ZNF75DP51815 510 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 CASP7P55210 303 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 ANAPC15P60006 121 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 PTPN12Q05209 780 aaKnown RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 PLA2G4DQ86XP0 818 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 CALR3Q96L12 384 aaKnown RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 ARGLU1Q9NWB6 273 aaPredicted RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 CWC25Q9NXE8 425 aaPredicted RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 TLR7Q9NYK1 1049 aaKnown RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 RPAP1Q9BWH6 1393 aaPredicted RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 TNS2Q63HR2 1409 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 H7C1W4 665 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 TBC1D8O95759 1140 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 CCDC192P0DO97 292 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 CASTP20810 708 aaKnown RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 C11orf91Q3C1V1 193 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 LMBR1LQ6UX01 489 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 LEKR1Q6ZMV7 388 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.47□□□□□ -0.73
PAX6-259ENST00000639916 FILIP1Q7Z7B0 1213 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 ROBO1Q9Y6N7 1651 aa10.47□□□□□ -0.73
PAX6-259ENST00000639916 ELP1O95163 1332 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 KIF2AO00139 706 aaPredicted RBP10.46□□□□□ -0.73
PAX6-259ENST00000639916 EPB41L2O43491 1005 aaKnown RBP10.46□□□□□ -0.73
PAX6-259ENST00000639916 ATP8B1O43520 1251 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 JMYQ8N9B5 988 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 EVI5LQ96CN4 794 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 TRIM5Q9C035 493 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 PDRG1Q9NUG6 133 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 CHMP3Q9Y3E7 222 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 KAT6BQ8WYB5 2073 aa10.46□□□□□ -0.73
PAX6-259ENST00000639916 COL15A1P39059 1388 aa10.46□□□□□ -0.74
PAX6-259ENST00000639916 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.74
PAX6-259ENST00000639916 EXOC5O00471 708 aa10.46□□□□□ -0.74
PAX6-259ENST00000639916 DSG3P32926 999 aa10.46□□□□□ -0.74
PAX6-259ENST00000639916 HSPA4P34932 840 aa10.46□□□□□ -0.74
PAX6-259ENST00000639916 CCDC93Q567U6 631 aa10.46□□□□□ -0.74
PAX6-259ENST00000639916 LRRC8AQ8IWT6 810 aa10.46□□□□□ -0.74
PAX6-259ENST00000639916 CCDC34Q96HJ3 373 aa10.46□□□□□ -0.74
PAX6-259ENST00000639916 INTS4Q96HW7 963 aaKnown RBP10.46□□□□□ -0.74
PAX6-259ENST00000639916 TRMT1Q9NXH9 659 aaKnown RBP10.46□□□□□ -0.74
PAX6-259ENST00000639916 ORC3Q9UBD5 711 aaPredicted RBP10.46□□□□□ -0.74
PAX6-259ENST00000639916 CCDC9Q9Y3X0 531 aaKnown RBP10.46□□□□□ -0.74
PAX6-259ENST00000639916 WDR33Q9C0J8 1336 aaKnown RBP10.46□□□□□ -0.74
PAX6-259ENST00000639916 PAPPAQ13219 1627 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 SCP2P22307 547 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 FOXO4P98177 505 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 TFCP2Q12800 502 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 DNAJC10Q8IXB1 793 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 RUFY2Q8WXA3 655 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 TEX13AQ9BXU3 409 aaPredicted RBP10.45□□□□□ -0.74
PAX6-259ENST00000639916 BOLA2Q9H3K6 86 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 CLIP2Q9UDT6 1046 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 TOGARAM1Q9Y4F4 1720 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 ARID5BQ14865 1188 aa10.45□□□□□ -0.74
PAX6-259ENST00000639916 LSG1Q9H089 658 aaKnown RBP10.45□□□□□ -0.74
PAX6-259ENST00000639916 COL14A1Q05707 1796 aaKnown RBP10.45□□□□□ -0.74
PAX6-259ENST00000639916 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
PAX6-259ENST00000639916 STARD3NLO95772 234 aa10.44□□□□□ -0.74
PAX6-259ENST00000639916 NBPF9Q3BBW0 867 aa10.44□□□□□ -0.74
PAX6-259ENST00000639916 CCAR2Q8N163 923 aaKnown RBP10.44□□□□□ -0.74
PAX6-259ENST00000639916 SYTL4Q96C24 671 aaPredicted RBP10.44□□□□□ -0.74
PAX6-259ENST00000639916 UPF3BQ9BZI7 483 aaKnown RBP10.44□□□□□ -0.74
PAX6-259ENST00000639916 MRVI1Q9Y6F6 885 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms