RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 IQGAP1P46940 1657 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 A2ML1A8K2U0 1454 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 CCDC194A0A1B0GVG4 234 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 SASH1O94885 1247 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 ITGA6P23229 1130 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 SPECC1Q5M775 1068 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 BRAPQ7Z569 592 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 DZIP3Q86Y13 1208 aaKnown RBP9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 CCDC12Q8WUD4 166 aaPredicted RBP9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 DHX58Q96C10 678 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 KRT23Q9C075 422 aa9.65□□□□□ -0.86
HNRNPU-222ENST00000639880 PHKG2P15735 406 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 LRRC24Q50LG9 513 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 IQSEC2Q5JU85 1478 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 A0A087WWV3 80 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 N4BP3O15049 544 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 CYP21A2P08686 494 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 POLA2Q14181 598 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 MEX3CQ5U5Q3 659 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 LEKR1Q6ZMV7 388 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 APPBP2Q92624 585 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 ESR2Q92731 530 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 TRERF1Q96PN7 1200 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 CDC5LQ99459 802 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 MBD4O95243 580 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 SLU7O95391 586 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 ZNF444Q8N0Y2 327 aaPredicted RBP9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 VAT1LQ9HCJ6 419 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 STX8Q9UNK0 236 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 NIP7Q9Y221 180 aaKnown RBP eCLIP9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 MED14O60244 1454 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 PLEKHG1Q9ULL1 1385 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 CCDC152Q4G0S7 254 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 IFIT1BQ5T764 474 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 CCDC181Q5TID7 509 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 ANO1Q5XXA6 986 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 ARHGEF25Q86VW2 580 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 UTP14AQ9BVJ6 771 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 CNNM2Q9H8M5 875 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 TCEAL9Q9UHQ7 104 aa9.64□□□□□ -0.87
HNRNPU-222ENST00000639880 HSPD1P10809 573 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 DNAJC10Q8IXB1 793 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 ANGEL1Q9UNK9 670 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 ZPR1O75312 459 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 EIF3JO75822 258 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 ZNF202O95125 648 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 U2AF2P26368 475 aaKnown RBP eCLIP9.63□□□□□ -0.875e-11■■■■■ 29.8
HNRNPU-222ENST00000639880 UBA7P41226 1012 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 CCDC43Q96MW1 224 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 FTOQ9C0B1 505 aaKnown RBP eCLIP9.63□□□□□ -0.873e-6■□□□□ 9.2
HNRNPU-222ENST00000639880 RNF216Q9NWF9 866 aaPredicted RBP9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 CWC15Q9P013 229 aaKnown RBP9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 PCDH11XQ9BZA7 1347 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 PCDH11YQ9BZA8 1340 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 ATP6V1AP38606 617 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 SCRN1Q12765 414 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 ATL3Q6DD88 541 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 NAA16Q6N069 864 aaPredicted RBP9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 KANK3Q6NY19 840 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 COPRSQ9NQ92 184 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 NRBP1Q9UHY1 535 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 NLRP1Q9C000 1473 aa9.63□□□□□ -0.87
HNRNPU-222ENST00000639880 JAKMIP3Q5VZ66 844 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 TMTC2Q8N394 836 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 HAUS7Q99871 368 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 PUS3Q9BZE2 481 aaKnown RBP9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 PYCARDQ9ULZ3 195 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 JAG2Q9Y219 1238 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 TRIM75PA6NK02 468 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 DNA2P51530 1060 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 TERF1P54274 439 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 MYL5Q02045 173 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 NECTIN1Q15223 517 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 ENOX2Q16206 610 aaKnown RBP9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 ARMT1Q9H993 441 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 CABP5Q9NP86 173 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 PTPRMP28827 1452 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 KRT222Q8N1A0 295 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 ARHGEF40Q8TER5 1519 aa9.62□□□□□ -0.87
HNRNPU-222ENST00000639880 PRDM1O75626 825 aa9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 ADD1P35611 737 aaKnown RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 MAPK8IP2Q13387 824 aaPredicted RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 BMS1Q14692 1282 aaKnown RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 KARSQ15046 597 aaKnown RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 RRAGBQ5VZM2 374 aa9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 ZSCAN29Q8IWY8 852 aaPredicted RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 DSCC1Q9BVC3 393 aa9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 SEC63Q9UGP8 760 aaKnown RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 IDEP14735 1019 aa9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 GTF2F1P35269 517 aaKnown RBP eCLIP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 KRI1Q8N9T8 703 aaKnown RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 KAT14Q9H8E8 782 aa9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 BCL2L12Q9HB09 334 aa9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 LZTFL1Q9NQ48 299 aa9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 BMP2KQ9NSY1 1161 aaPredicted RBP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 RBM5P52756 815 aaKnown RBP eCLIP9.61□□□□□ -0.87
HNRNPU-222ENST00000639880 PDE4BQ07343 736 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms