RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 CYP7A1P22680 504 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 RASGRF1Q13972 1273 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 CSPP1Q1MSJ5 1256 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 CAVIN4Q5BKX8 364 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 TBC1D9BQ66K14 1250 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 SPATA32Q96LK8 384 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 B4E1Z4 1266 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 DSCC1Q9BVC3 393 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 KIF3AQ9Y496 699 aa11.4□□□□□ -0.58
CACNA1A-248ENST00000637774 GIMAP6Q6P9H5 292 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 NCOA7Q8NI08 942 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 NUP133Q8WUM0 1156 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 MYL10Q9BUA6 226 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 DENND2AQ9ULE3 1009 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 MRC1P22897 1456 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 CDHR2Q9BYE9 1310 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 POLR3DP05423 398 aaPredicted RBP11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 MCM5P33992 734 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 CTDSPL2Q05D32 466 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 SCRN1Q12765 414 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 TPTE2Q6XPS3 522 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 FAM196AQ6ZSG2 479 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 PLA2G12BQ9BX93 195 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 SLC4A4Q9Y6R1 1079 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 MROH5Q6ZUA9 1318 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 KCPQ6ZWJ8 1503 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 PRKAB2O43741 272 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 ATP2B1P20020 1258 aa11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 CELF1Q92879 486 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-248ENST00000637774 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
CACNA1A-248ENST00000637774 CKAP2LQ8IYA6 745 aa11.38□□□□□ -0.59
CACNA1A-248ENST00000637774 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
CACNA1A-248ENST00000637774 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
CACNA1A-248ENST00000637774 PIBF1Q8WXW3 757 aa11.38□□□□□ -0.59
CACNA1A-248ENST00000637774 RBSNQ9H1K0 784 aa11.38□□□□□ -0.59
CACNA1A-248ENST00000637774 HSPA1LP34931 641 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 ST3GAL1Q11201 340 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 SYNE3Q6ZMZ3 975 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 SDR42E1Q8WUS8 393 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 GTF3C6Q969F1 213 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 TSPY26PQ9H489 355 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 TNS2Q63HR2 1409 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 ADD2P35612 726 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 FSD2A1L4K1 749 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 PRDM1O75626 825 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 GJB4Q9NTQ9 266 aa11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 ORC3Q9UBD5 711 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-248ENST00000637774 AFF2P51816 1311 aa11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 TRIM37O94972 964 aa11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 NTSR2O95665 410 aa11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 RPS8P62241 208 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 VPS72Q15906 364 aa11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 TMEM67Q5HYA8 995 aa11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 CPLX2Q6PUV4 134 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 RPAP1Q9BWH6 1393 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 ERICH2A1L162 156 aa11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 ME1P48163 572 aa11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 UBE2HP62256 183 aa11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 RANBP6O60518 1105 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 GPR101Q96P66 508 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 FTOQ9C0B1 505 aaKnown RBP eCLIP11.36□□□□□ -0.59
CACNA1A-248ENST00000637774 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
CACNA1A-248ENST00000637774 C8orf76Q96K31 380 aa11.35□□□□□ -0.59
CACNA1A-248ENST00000637774 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-248ENST00000637774 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
CACNA1A-248ENST00000637774 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
CACNA1A-248ENST00000637774 GJD4Q96KN9 370 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-248ENST00000637774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 PDIA3P30101 505 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 ZRSR1Q15695 479 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 TTC6Q86TZ1 520 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 PHKBQ93100 1093 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 ZNF219Q9P2Y4 722 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 AFDNP55196 1824 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 JCADQ9P266 1359 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 MSNP26038 577 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 METAP2P50579 478 aaKnown RBP eCLIP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 NAA16Q6N069 864 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 CLEC17AQ6ZS10 378 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 PARP4Q9UKK3 1724 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 HMGN5P82970 282 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 IFNL3Q8IZI9 196 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 CNBD1Q8NA66 436 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 RPGRQ92834 1020 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 DACT1Q9NYF0 836 aa11.34□□□□□ -0.59
CACNA1A-248ENST00000637774 DISP2A7MBM2 1401 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms