RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 ZYXQ15942 572 aaKnown RBP8.09□□□□□ -1.11
CLN5-210ENST00000636520 CTU1Q7Z7A3 348 aaKnown RBP8.09□□□□□ -1.11
CLN5-210ENST00000636520 PPM1EQ8WY54 764 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 ZC3H4Q9UPT8 1303 aaKnown RBP8.09□□□□□ -1.12
CLN5-210ENST00000636520 RAG1P15918 1043 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 GLT8D2Q9H1C3 349 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 MFSD1Q9H3U5 465 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 RCAN3Q9UKA8 241 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 INSRP06213 1382 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 MAP3K1Q13233 1512 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 CEP170BQ9Y4F5 1589 aaPredicted RBP8.08□□□□□ -1.12
CLN5-210ENST00000636520 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 POTEJP0CG39 1038 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 EXOSC9Q06265 439 aaKnown RBP8.08□□□□□ -1.12
CLN5-210ENST00000636520 PDE4DQ08499 809 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 TMEM266Q2M3C6 531 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 ILDR2Q71H61 639 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 GPC2Q8N158 579 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 GLT1D1Q96MS3 346 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 CRAMP1Q96RY5 1269 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 WRNIP1Q96S55 665 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 VPS33BQ9H267 617 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 PTPN23Q9H3S7 1636 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 MYO5CQ9NQX4 1742 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 RAB11FIP3O75154 756 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 ASNSP08243 561 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 MROH5Q6ZUA9 1318 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 SP8Q8IXZ3 490 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 MARCH10Q8NA82 808 aaPredicted RBP8.08□□□□□ -1.12
CLN5-210ENST00000636520 U3KPZ7 1027 aaPredicted RBP8.08□□□□□ -1.12
CLN5-210ENST00000636520 SPATA31D1Q6ZQQ2 1576 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 A0A1W2PP64 1363 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 SSBP05455 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
CLN5-210ENST00000636520 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 HSCBQ8IWL3 235 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 THUMPD2Q9BTF0 503 aaKnown RBP8.08□□□□□ -1.12
CLN5-210ENST00000636520 MLXIPQ9HAP2 919 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 GGA3Q9NZ52 723 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 GINS2Q9Y248 185 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 ATP6V1DQ9Y5K8 247 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 SSH2Q76I76 1423 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 FLOT1O75955 427 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 ITGA6P23229 1130 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 GMPSP49915 693 aaPredicted RBP8.08□□□□□ -1.12
CLN5-210ENST00000636520 RARSP54136 660 aaKnown RBP8.08□□□□□ -1.12
CLN5-210ENST00000636520 ZFYVE27Q5T4F4 411 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 NLRX1Q86UT6 975 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 CSRNP1Q96S65 589 aa8.08□□□□□ -1.12
CLN5-210ENST00000636520 DHX36Q9H2U1 1008 aaKnown RBP8.08□□□□□ -1.12
CLN5-210ENST00000636520 ARHGEF37A1IGU5 675 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 PTPDC1A2A3K4 754 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 POTEB2H3BUK9 544 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 TMOD1P28289 359 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 DCTN1Q14203 1278 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 NECAB2Q7Z6G3 386 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 ERMNQ8TAM6 284 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 HOXC10Q9NYD6 342 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 RNF17Q9BXT8 1623 aaKnown RBP8.07□□□□□ -1.12
CLN5-210ENST00000636520 ZNF804BA4D1E1 1349 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 PRAMEF22A3QJZ6 481 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 PIDD1Q9HB75 910 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 SUPT16HQ9Y5B9 1047 aaKnown RBP8.07□□□□□ -1.12
CLN5-210ENST00000636520 GRM8O00222 908 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 OFD1O75665 1012 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 NBPF9Q3BBW0 867 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
CLN5-210ENST00000636520 CCDC17Q96LX7 622 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 NFIXQ14938 502 aa8.07□□□□□ -1.12
CLN5-210ENST00000636520 NOLC1Q14978 699 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLN5-210ENST00000636520 COL23A1Q86Y22 540 aaPredicted RBP8.07□□□□□ -1.12
CLN5-210ENST00000636520 MSCO60682 206 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 MTHFSDQ2M296 383 aaKnown RBP8.06□□□□□ -1.12
CLN5-210ENST00000636520 ZC3H15Q8WU90 426 aaKnown RBP8.06□□□□□ -1.12
CLN5-210ENST00000636520 NBPF26B4DH59 902 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 SEMA3EO15041 775 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 NUDT18Q6ZVK8 323 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 USP37Q86T82 979 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 ESR2Q92731 530 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 CHPF2Q9P2E5 772 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 TPM1P09493 284 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 HSPA1AP0DMV8 641 aaKnown RBP8.06□□□□□ -1.12
CLN5-210ENST00000636520 HSPA1BP0DMV9 641 aaKnown RBP8.06□□□□□ -1.12
CLN5-210ENST00000636520 ELF1P32519 619 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 NLRP5P59047 1200 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 UBE4AQ14139 1066 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 KCNG1Q9UIX4 513 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 ECE2O60344 883 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 GCLCP48506 637 aaPredicted RBP8.06□□□□□ -1.12
CLN5-210ENST00000636520 AOC3Q16853 763 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 AGBL3Q8NEM8 1001 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 PPP2R3BQ9Y5P8 575 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 KRT32Q14532 448 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 HMX1Q9NP08 348 aaPredicted RBP8.06□□□□□ -1.12
CLN5-210ENST00000636520 AAASQ9NRG9 546 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 POLKQ9UBT6 870 aa8.06□□□□□ -1.12
CLN5-210ENST00000636520 MAP2K2P36507 400 aa8.05□□□□□ -1.12
CLN5-210ENST00000636520 SP3Q02447 781 aa8.05□□□□□ -1.12
CLN5-210ENST00000636520 MCF2L2Q86YR7 1114 aa8.05□□□□□ -1.12
CLN5-210ENST00000636520 GLG1Q92896 1179 aa8.05□□□□□ -1.12
CLN5-210ENST00000636520 GCNAQ96QF7 691 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms