RNA–Protein interactions for RNA: ENST00000630319.2

TCF4-271, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-271ENST00000630319 CEP135Q66GS9 1140 aa10.06□□□□□ -0.8
TCF4-271ENST00000630319 BEND7Q8N7W2 519 aaPredicted RBP10.06□□□□□ -0.8
TCF4-271ENST00000630319 TCF12Q99081 682 aa10.06□□□□□ -0.8
TCF4-271ENST00000630319 BHLHE41Q9C0J9 482 aaPredicted RBP10.06□□□□□ -0.8
TCF4-271ENST00000630319 PDE2AO00408 941 aaPredicted RBP10.05□□□□□ -0.8
TCF4-271ENST00000630319 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
TCF4-271ENST00000630319 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
TCF4-271ENST00000630319 CCNJLQ8IV13 435 aa10.05□□□□□ -0.8
TCF4-271ENST00000630319 ADAM19Q9H013 955 aa10.05□□□□□ -0.8
TCF4-271ENST00000630319 CEP162Q5TB80 1403 aa10.05□□□□□ -0.8
TCF4-271ENST00000630319 LDHBP07195 334 aaKnown RBP10.04□□□□□ -0.8
TCF4-271ENST00000630319 EAPPQ56P03 285 aaPredicted RBP10.04□□□□□ -0.8
TCF4-271ENST00000630319 MSL1Q68DK7 614 aa10.04□□□□□ -0.8
TCF4-271ENST00000630319 ALG1LQ6GMV1 187 aa10.04□□□□□ -0.8
TCF4-271ENST00000630319 GLIS3Q8NEA6 775 aa10.04□□□□□ -0.8
TCF4-271ENST00000630319 SCARF2Q96GP6 870 aaPredicted RBP10.04□□□□□ -0.8
TCF4-271ENST00000630319 SUV39H2Q9H5I1 410 aa10.04□□□□□ -0.8
TCF4-271ENST00000630319 EFCAB5A4FU69 1503 aa10.03□□□□□ -0.8
TCF4-271ENST00000630319 GDF6Q6KF10 455 aaPredicted RBP10.03□□□□□ -0.8
TCF4-271ENST00000630319 PODNQ7Z5L7 613 aa10.03□□□□□ -0.8
TCF4-271ENST00000630319 CACTIN-AS1Q8N1I8 211 aa10.03□□□□□ -0.8
TCF4-271ENST00000630319 SAMD9Q5K651 1589 aa10.02□□□□□ -0.81
TCF4-271ENST00000630319 NUP160Q12769 1436 aa10.02□□□□□ -0.81
TCF4-271ENST00000630319 PRPF40AO75400 957 aaKnown RBP10.02□□□□□ -0.81
TCF4-271ENST00000630319 GRM2Q14416 872 aa10.02□□□□□ -0.81
TCF4-271ENST00000630319 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
TCF4-271ENST00000630319 PRPF40BQ6NWY9 871 aaKnown RBP10.02□□□□□ -0.81
TCF4-271ENST00000630319 PLVAPQ9BX97 442 aa10.02□□□□□ -0.81
TCF4-271ENST00000630319 LIN7BQ9HAP6 207 aa10.02□□□□□ -0.81
TCF4-271ENST00000630319 SOX13Q9UN79 622 aa10.02□□□□□ -0.81
TCF4-271ENST00000630319 CLASP1Q7Z460 1538 aa10.02□□□□□ -0.81
TCF4-271ENST00000630319 KIAA0586Q9BVV6 1533 aa10.02□□□□□ -0.81
TCF4-271ENST00000630319 CLIP1P30622 1438 aa10.01□□□□□ -0.81
TCF4-271ENST00000630319 SHROOM2Q13796 1616 aa10.01□□□□□ -0.81
TCF4-271ENST00000630319 ATP2B2Q01814 1243 aa10.01□□□□□ -0.81
TCF4-271ENST00000630319 TAGLNQ01995 201 aaKnown RBP10.01□□□□□ -0.81
TCF4-271ENST00000630319 RGS22Q8NE09 1264 aa10.01□□□□□ -0.81
TCF4-271ENST00000630319 LACRTQ9GZZ8 138 aa10.01□□□□□ -0.81
TCF4-271ENST00000630319 KIAA0556O60303 1618 aa10□□□□□ -0.81
TCF4-271ENST00000630319 METTL12A8MUP2 240 aa10□□□□□ -0.81
TCF4-271ENST00000630319 PIK3R2O00459 728 aa10□□□□□ -0.81
TCF4-271ENST00000630319 PTPRAP18433 802 aa10□□□□□ -0.81
TCF4-271ENST00000630319 COL8A1P27658 744 aa10□□□□□ -0.81
TCF4-271ENST00000630319 GRIA4P48058 902 aa10□□□□□ -0.81
TCF4-271ENST00000630319 GSK3AP49840 483 aa10□□□□□ -0.81
TCF4-271ENST00000630319 WFDC8Q8IUA0 241 aa10□□□□□ -0.81
TCF4-271ENST00000630319 IL22RA1Q8N6P7 574 aa10□□□□□ -0.81
TCF4-271ENST00000630319 ABCB6Q9NP58 842 aa10□□□□□ -0.81
TCF4-271ENST00000630319 RNF19AQ9NV58 838 aa10□□□□□ -0.81
TCF4-271ENST00000630319 TM4SF5O14894 197 aa9.99□□□□□ -0.81
TCF4-271ENST00000630319 EPHA1P21709 976 aa9.99□□□□□ -0.81
TCF4-271ENST00000630319 CDC27P30260 824 aa9.99□□□□□ -0.81
TCF4-271ENST00000630319 VN1R5Q7Z5H4 357 aa9.99□□□□□ -0.81
TCF4-271ENST00000630319 DMRTC2Q8IXT2 367 aaPredicted RBP9.99□□□□□ -0.81
TCF4-271ENST00000630319 EHD4Q9H223 541 aa9.99□□□□□ -0.81
TCF4-271ENST00000630319 SH2B1Q9NRF2 756 aaPredicted RBP9.99□□□□□ -0.81
TCF4-271ENST00000630319 NLRP2Q9NX02 1062 aa9.99□□□□□ -0.81
TCF4-271ENST00000630319 UGGT2Q9NYU1 1516 aa9.98□□□□□ -0.81
TCF4-271ENST00000630319 GADD45BO75293 160 aaPredicted RBP9.98□□□□□ -0.81
TCF4-271ENST00000630319 BSNDQ8WZ55 320 aa9.98□□□□□ -0.81
TCF4-271ENST00000630319 DUSP9Q99956 384 aaKnown RBP9.98□□□□□ -0.81
TCF4-271ENST00000630319 BCO2Q9BYV7 579 aa9.98□□□□□ -0.81
TCF4-271ENST00000630319 OSBPL7Q9BZF2 842 aa9.98□□□□□ -0.81
TCF4-271ENST00000630319 MUC3BQ9H195 1237 aa9.98□□□□□ -0.81
TCF4-271ENST00000630319 A0A0A0MRY4 1105 aa9.97□□□□□ -0.81
TCF4-271ENST00000630319 ITPKAP23677 461 aa9.97□□□□□ -0.81
TCF4-271ENST00000630319 FGD1P98174 961 aa9.97□□□□□ -0.81
TCF4-271ENST00000630319 SPRED3Q2MJR0 410 aa9.97□□□□□ -0.81
TCF4-271ENST00000630319 DTWD1Q8N5C7 304 aa9.97□□□□□ -0.81
TCF4-271ENST00000630319 PODXL2Q9NZ53 605 aa9.97□□□□□ -0.81
TCF4-271ENST00000630319 NOP53Q9NZM5 478 aaKnown RBP9.97□□□□□ -0.81
TCF4-271ENST00000630319 TRAK1Q9UPV9 953 aa9.97□□□□□ -0.81
TCF4-271ENST00000630319 PPME1Q9Y570 386 aa9.97□□□□□ -0.81
TCF4-271ENST00000630319 A0A096LPE4 126 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 A0A1W2PPZ6 126 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 DEAF1O75398 565 aaPredicted RBP9.96□□□□□ -0.82
TCF4-271ENST00000630319 GNA15P30679 374 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 TRAPPC3LQ5T215 181 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 NXPE4Q6UWF7 544 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 FRMD6Q96NE9 622 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 BCL2L13Q9BXK5 485 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 CCDC9Q9Y3X0 531 aaKnown RBP9.96□□□□□ -0.82
TCF4-271ENST00000630319 ARHGAP35Q9NRY4 1499 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.82
TCF4-271ENST00000630319 GIPC1O14908 333 aa9.95□□□□□ -0.82
TCF4-271ENST00000630319 PTPN12Q05209 780 aaKnown RBP9.95□□□□□ -0.82
TCF4-271ENST00000630319 KCNMA1Q12791 1236 aa9.95□□□□□ -0.82
TCF4-271ENST00000630319 SETDB1Q15047 1291 aa9.95□□□□□ -0.82
TCF4-271ENST00000630319 ASAP3Q8TDY4 903 aa9.95□□□□□ -0.82
TCF4-271ENST00000630319 PARP2Q9UGN5 583 aa9.95□□□□□ -0.82
TCF4-271ENST00000630319 CARMIL2Q6F5E8 1435 aa9.95□□□□□ -0.82
TCF4-271ENST00000630319 PCF11O94913 1555 aaKnown RBP9.94□□□□□ -0.82
TCF4-271ENST00000630319 ARAP1Q96P48 1450 aa9.94□□□□□ -0.82
TCF4-271ENST00000630319 FHOD3Q2V2M9 1422 aa9.94□□□□□ -0.82
TCF4-271ENST00000630319 SPDYE3A6NKU9 549 aa9.94□□□□□ -0.82
TCF4-271ENST00000630319 RNF225M0QZC1 329 aaPredicted RBP9.94□□□□□ -0.82
TCF4-271ENST00000630319 DAB2P98082 770 aa9.94□□□□□ -0.82
TCF4-271ENST00000630319 FMR1NBQ8N0W7 255 aaPredicted RBP9.94□□□□□ -0.82
TCF4-271ENST00000630319 SRCIN1Q9C0H9 1055 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms