RNA–Protein interactions for RNA: ENST00000630319.2

TCF4-271, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-271ENST00000630319 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
TCF4-271ENST00000630319 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
TCF4-271ENST00000630319 PHF23Q9BUL5 403 aaPredicted RBP26.13■■□□□ 1.77
TCF4-271ENST00000630319 SENP3Q9H4L4 574 aaPredicted RBP25.55■■□□□ 1.68
TCF4-271ENST00000630319 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
TCF4-271ENST00000630319 FOXD1Q16676 465 aa23.75■■□□□ 1.39
TCF4-271ENST00000630319 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
TCF4-271ENST00000630319 ADRA2BP18089 450 aa22.93■■□□□ 1.26
TCF4-271ENST00000630319 PIAS4Q8N2W9 510 aaPredicted RBP22.35■■□□□ 1.17
TCF4-271ENST00000630319 MSH5O43196 834 aa21.77■■□□□ 1.08
TCF4-271ENST00000630319 PPP4R3CPQ6ZMV5 832 aa21.25■□□□□ 0.99
TCF4-271ENST00000630319 KCNA4P22459 653 aa20.95■□□□□ 0.94
TCF4-271ENST00000630319 SCAF1Q9H7N4 1312 aaKnown RBP20.9■□□□□ 0.94
TCF4-271ENST00000630319 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.92
TCF4-271ENST00000630319 NCBP3Q53F19 620 aaKnown RBP20.68■□□□□ 0.9
TCF4-271ENST00000630319 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
TCF4-271ENST00000630319 NPM3O75607 178 aaKnown RBP20.46■□□□□ 0.87
TCF4-271ENST00000630319 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
TCF4-271ENST00000630319 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
TCF4-271ENST00000630319 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
TCF4-271ENST00000630319 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
TCF4-271ENST00000630319 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
TCF4-271ENST00000630319 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
TCF4-271ENST00000630319 EHMT2Q96KQ7 1210 aa19.49■□□□□ 0.71
TCF4-271ENST00000630319 DCAF8L1A6NGE4 600 aa19.41■□□□□ 0.7
TCF4-271ENST00000630319 ZBTB22O15209 634 aa19.33■□□□□ 0.68
TCF4-271ENST00000630319 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
TCF4-271ENST00000630319 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
TCF4-271ENST00000630319 FOXD4L1Q9NU39 408 aa19.21■□□□□ 0.67
TCF4-271ENST00000630319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.64
TCF4-271ENST00000630319 MYCNP04198 464 aaPredicted RBP18.87■□□□□ 0.61
TCF4-271ENST00000630319 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
TCF4-271ENST00000630319 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
TCF4-271ENST00000630319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
TCF4-271ENST00000630319 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
TCF4-271ENST00000630319 ATXN8OSP0DMR3 200 aa18.56■□□□□ 0.56
TCF4-271ENST00000630319 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
TCF4-271ENST00000630319 C1QBPQ07021 282 aaKnown RBP18.48■□□□□ 0.55
TCF4-271ENST00000630319 ATF5Q9Y2D1 282 aaPredicted RBP18.41■□□□□ 0.54
TCF4-271ENST00000630319 APLP2Q06481 763 aa18.32■□□□□ 0.52
TCF4-271ENST00000630319 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
TCF4-271ENST00000630319 CAPN15O75808 1086 aa18.1■□□□□ 0.49
TCF4-271ENST00000630319 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
TCF4-271ENST00000630319 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
TCF4-271ENST00000630319 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
TCF4-271ENST00000630319 DSG3P32926 999 aa17.87■□□□□ 0.45
TCF4-271ENST00000630319 POLA2Q14181 598 aa17.84■□□□□ 0.45
TCF4-271ENST00000630319 ABCB7O75027 752 aa17.8■□□□□ 0.44
TCF4-271ENST00000630319 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
TCF4-271ENST00000630319 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
TCF4-271ENST00000630319 FBLN2P98095 1184 aa17.51■□□□□ 0.39
TCF4-271ENST00000630319 FKBP8Q14318 412 aa17.36■□□□□ 0.37
TCF4-271ENST00000630319 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
TCF4-271ENST00000630319 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
TCF4-271ENST00000630319 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
TCF4-271ENST00000630319 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
TCF4-271ENST00000630319 SPDYE2Q495Y8 402 aa17.11■□□□□ 0.33
TCF4-271ENST00000630319 PROM2Q8N271 834 aa17.09■□□□□ 0.33
TCF4-271ENST00000630319 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
TCF4-271ENST00000630319 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
TCF4-271ENST00000630319 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
TCF4-271ENST00000630319 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
TCF4-271ENST00000630319 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
TCF4-271ENST00000630319 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
TCF4-271ENST00000630319 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
TCF4-271ENST00000630319 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
TCF4-271ENST00000630319 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
TCF4-271ENST00000630319 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
TCF4-271ENST00000630319 PITPNM1O00562 1244 aa16.47■□□□□ 0.23
TCF4-271ENST00000630319 CLEC11AQ9Y240 323 aa16.4■□□□□ 0.22
TCF4-271ENST00000630319 IFNLR1Q8IU57 520 aaPredicted RBP16.33■□□□□ 0.2
TCF4-271ENST00000630319 PRR29P0C7W0 189 aa16.3■□□□□ 0.2
TCF4-271ENST00000630319 MIER1Q8N108 512 aa16.26■□□□□ 0.19
TCF4-271ENST00000630319 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
TCF4-271ENST00000630319 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
TCF4-271ENST00000630319 CHRDL2Q6WN34 429 aa16.21■□□□□ 0.19
TCF4-271ENST00000630319 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
TCF4-271ENST00000630319 MNX1P50219 401 aaPredicted RBP16.13■□□□□ 0.17
TCF4-271ENST00000630319 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
TCF4-271ENST00000630319 KLHL34Q8N239 644 aa16.09■□□□□ 0.17
TCF4-271ENST00000630319 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.16
TCF4-271ENST00000630319 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
TCF4-271ENST00000630319 PIP4P2Q8N4L2 257 aa16.06■□□□□ 0.16
TCF4-271ENST00000630319 ZBTB47Q9UFB7 747 aaPredicted RBP16.06■□□□□ 0.16
TCF4-271ENST00000630319 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
TCF4-271ENST00000630319 SPOCK2Q92563 424 aa16.05■□□□□ 0.16
TCF4-271ENST00000630319 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
TCF4-271ENST00000630319 NUBP1P53384 320 aa15.95■□□□□ 0.14
TCF4-271ENST00000630319 FARP1Q9Y4F1 1045 aaPredicted RBP15.93■□□□□ 0.14
TCF4-271ENST00000630319 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
TCF4-271ENST00000630319 PKD2Q13563 968 aa15.85■□□□□ 0.13
TCF4-271ENST00000630319 RASEFQ8IZ41 740 aa15.82■□□□□ 0.12
TCF4-271ENST00000630319 GSE1Q14687 1217 aa15.72■□□□□ 0.11
TCF4-271ENST00000630319 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
TCF4-271ENST00000630319 FAM212AQ96EL1 285 aa15.71■□□□□ 0.11
TCF4-271ENST00000630319 DCAF8Q5TAQ9 597 aa15.68■□□□□ 0.1
TCF4-271ENST00000630319 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
TCF4-271ENST00000630319 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
TCF4-271ENST00000630319 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
TCF4-271ENST00000630319 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms