RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	FAM83G	A6ND36	823 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	C1QTNF9B	B2RNN3	333 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	GC	P02774	474 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	FURIN	P09958	794 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	ZC3H6	P61129	1189 aa	Known RBP	9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	WASHC4	Q2M389	1173 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	ZDHHC3	Q9NYG2	299 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	NFAT5	O94916	1531 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	MARF1	Q9Y4F3	1742 aa	Known RBP	9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	ATRN	O75882	1429 aa		9.39	□□□□□ -0.91
LINC02028-223	ENST00000625668	COL14A1	Q05707	1796 aa	Known RBP	9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	CDK2AP1	O14519	115 aa		9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	ADH6	P28332	368 aa		9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	CHRNA2	Q15822	529 aa		9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	CHSY3	Q70JA7	882 aa		9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	CD163	Q86VB7	1156 aa		9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	FCHSD1	Q86WN1	690 aa		9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	NOP53	Q9NZM5	478 aa	Known RBP	9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	USP54	Q70EL1	1684 aa		9.38	□□□□□ -0.91
LINC02028-223	ENST00000625668	CCDC7	Q96M83	1385 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	ZBTB7C	A1YPR0	619 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	DCDC2B	A2VCK2	349 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668		A6NJY4	79 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	CD33	P20138	364 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	ARSJ	Q5FYB0	599 aa	Predicted RBP	9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	UNC5CL	Q8IV45	518 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	ZIC5	Q96T25	663 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	BTG4	Q9NY30	223 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	SERTAD1	Q9UHV2	236 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	USP3	Q9Y6I4	520 aa		9.37	□□□□□ -0.91
LINC02028-223	ENST00000625668	WASHC2A	Q641Q2	1341 aa		9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	FAM157B	P0CG42	384 aa		9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	SOX11	P35716	441 aa		9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	ABL2	P42684	1182 aa		9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	KCNH5	Q8NCM2	988 aa		9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	QTRT2	Q9H974	415 aa	Known RBP	9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	TRPC5	Q9UL62	973 aa	Predicted RBP	9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	PCDHGA11	Q9Y5H2	935 aa		9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	NRAP	Q86VF7	1730 aa		9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	LMO7	Q8WWI1	1683 aa		9.36	□□□□□ -0.91
LINC02028-223	ENST00000625668	RGS12	O14924	1447 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	KHNYN	O15037	678 aa	Known RBP	9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	FYB1	O15117	783 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	TAT	P17735	454 aa	Predicted RBP	9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	RXRB	P28702	533 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	CHRNA4	P43681	627 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	SEMA3F	Q13275	785 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	COG3	Q96JB2	828 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	GGNBP2	Q9H3C7	697 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	PANK3	Q9H999	370 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	NWD2	Q9ULI1	1742 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	CAMTA1	Q9Y6Y1	1673 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	AATK	Q6ZMQ8	1374 aa		9.35	□□□□□ -0.91
LINC02028-223	ENST00000625668	LRP5	O75197	1615 aa		9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	GLI3	P10071	1580 aa		9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	ZEB1	P37275	1124 aa	Predicted RBP	9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	RBM6	P78332	1123 aa	Known RBP	9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	VPS72	Q15906	364 aa		9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	SAMD5	Q5TGI4	173 aa		9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	ZNF468	Q5VIY5	522 aa	Predicted RBP	9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	ARHGEF25	Q86VW2	580 aa		9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	EP400	Q96L91	3159 aa		9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	COL5A2	P05997	1499 aa	Predicted RBP	9.34	□□□□□ -0.91
LINC02028-223	ENST00000625668	CGNL1	Q0VF96	1302 aa		9.33	□□□□□ -0.92
LINC02028-223	ENST00000625668	ABCC6	O95255	1503 aa		9.33	□□□□□ -0.92
LINC02028-223	ENST00000625668	STRN4	Q9NRL3	753 aa		9.33	□□□□□ -0.92
LINC02028-223	ENST00000625668	CCDC9	Q9Y3X0	531 aa	Known RBP	9.33	□□□□□ -0.92
LINC02028-223	ENST00000625668	EFS	O43281	561 aa		9.32	□□□□□ -0.92
LINC02028-223	ENST00000625668	LAMC2	Q13753	1193 aa		9.32	□□□□□ -0.92
LINC02028-223	ENST00000625668		Q8N3U1	123 aa		9.32	□□□□□ -0.92
LINC02028-223	ENST00000625668	KIF20B	Q96Q89	1820 aa		9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	PIK3CD	O00329	1044 aa		9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	FBLN1	P23142	703 aa		9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	PCBP4	P57723	403 aa	Known RBP	9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	LARP1	Q6PKG0	1096 aa	Known RBP	9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	TRIM11	Q96F44	468 aa		9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	MARK1	Q9P0L2	795 aa		9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	MAP3K19	Q56UN5	1328 aa		9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	SPATA31A5	Q5VU36	1347 aa		9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	SPATA31A7	Q8IWB4	1347 aa		9.31	□□□□□ -0.92
LINC02028-223	ENST00000625668	RTL1	A6NKG5	1358 aa		9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	NSD2	O96028	1365 aa		9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	EVA1C	P58658	441 aa		9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	MDFI	Q99750	246 aa		9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	SCHIP1	Q9P0W5	487 aa	Predicted RBP	9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	KNSTRN	Q9Y448	316 aa		9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	GJA3	Q9Y6H8	435 aa		9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	BLM	P54132	1417 aa	Predicted RBP	9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	CRB1	P82279	1406 aa		9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	SPATA31A1	Q5TZJ5	1347 aa		9.3	□□□□□ -0.92
LINC02028-223	ENST00000625668	COL18A1	P39060	1754 aa		9.29	□□□□□ -0.92
LINC02028-223	ENST00000625668	BACH1	O14867	736 aa		9.29	□□□□□ -0.92
LINC02028-223	ENST00000625668	ITGB7	P26010	798 aa		9.29	□□□□□ -0.92
LINC02028-223	ENST00000625668	TXLNA	P40222	546 aa		9.29	□□□□□ -0.92
LINC02028-223	ENST00000625668	RRS1	Q15050	365 aa	Known RBP	9.29	□□□□□ -0.92
LINC02028-223	ENST00000625668	ZDHHC1	Q8WTX9	485 aa		9.29	□□□□□ -0.92
LINC02028-223	ENST00000625668	USP35	Q9P2H5	1018 aa		9.29	□□□□□ -0.92
LINC02028-223	ENST00000625668	PRR12	Q9ULL5	1215 aa		9.29	□□□□□ -0.92
LINC02028-223	ENST00000625668	PARP3	Q9Y6F1	533 aa		9.29	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms