RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 NBPF5PQ86XG9 351 aaPredicted RBP7.21□□□□□ -1.26
ERCC6-209ENST00000623073 AFAP1L2Q8N4X5 818 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 ANKRD44Q8N8A2 993 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 SSH1Q8WYL5 1049 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 CALML4Q96GE6 196 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 NBPF4Q96M43 638 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 SCOCQ9UIL1 159 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 ALDH1L1O75891 902 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 ZFXP17010 805 aaPredicted RBP7.21□□□□□ -1.26
ERCC6-209ENST00000623073 CALML3P27482 149 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 EIF3BP55884 814 aaKnown RBP7.21□□□□□ -1.26
ERCC6-209ENST00000623073 ST5P78524 1137 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 TMED1Q13445 227 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 RASEFQ8IZ41 740 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 TRERF1Q96PN7 1200 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 BABAM1Q9NWV8 329 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 TRIM27P14373 513 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 MRPS25P82663 173 aaKnown RBP7.21□□□□□ -1.26
ERCC6-209ENST00000623073 RILPL1Q5EBL4 403 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 TXLNGQ9NUQ3 528 aa7.21□□□□□ -1.26
ERCC6-209ENST00000623073 MYO1CO00159 1063 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 TDRD12Q587J7 1177 aaKnown RBP7.2□□□□□ -1.26
ERCC6-209ENST00000623073 CAPS2Q9BXY5 557 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 ISM2Q6H9L7 571 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 TSPYL2Q9H2G4 693 aaPredicted RBP7.2□□□□□ -1.26
ERCC6-209ENST00000623073 RWDD2BP57060 319 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 SYNJ2O15056 1496 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 CAMK4Q16566 473 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 ERMNQ8TAM6 284 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 CENPKQ9BS16 269 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 PAIP2BQ9ULR5 123 aaKnown RBP7.2□□□□□ -1.26
ERCC6-209ENST00000623073 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.2□□□□□ -1.26
ERCC6-209ENST00000623073 SLC4A2P04920 1241 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 HSPA6P17066 643 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 TRHP20396 242 aaPredicted RBP7.2□□□□□ -1.26
ERCC6-209ENST00000623073 DCTPP1Q9H773 170 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 SPTLC2O15270 562 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 STAMBPL1Q96FJ0 436 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 CEP126Q9P2H0 1117 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 PTGS1P23219 599 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 MAN1A1P33908 653 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 NUF2Q9BZD4 464 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 FGFR1OP2Q9NVK5 253 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
ERCC6-209ENST00000623073 SYNJ1O43426 1573 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 RIC3Q7Z5B4 369 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 BBOF1Q8ND07 529 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 RAB3IL1Q8TBN0 382 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 GTF3C6Q969F1 213 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 VTI1AQ96AJ9 217 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 NOX5Q96PH1 765 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 HAUS8Q9BT25 410 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 MSH6P52701 1360 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 BLMP54132 1417 aaPredicted RBP7.2□□□□□ -1.26
ERCC6-209ENST00000623073 PLCB4Q15147 1175 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 SKIDA1Q1XH10 827 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 NBPF14Q5TI25 921 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 WHAMMQ8TF30 809 aa7.2□□□□□ -1.26
ERCC6-209ENST00000623073 SEPT11Q9NVA2 429 aaKnown RBP7.2□□□□□ -1.26
ERCC6-209ENST00000623073 CFAP73A6NFT4 308 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 PFDN1O60925 122 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 CALM1P0DP23 149 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 CALM2P0DP24 149 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 CALM3P0DP25 149 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 ELF2Q15723 593 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 NME8Q8N427 588 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 IQUBQ8NA54 791 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 TDRD7Q8NHU6 1098 aaKnown RBP7.19□□□□□ -1.26
ERCC6-209ENST00000623073 MIS18AQ9NYP9 233 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 ZFYVE9O95405 1425 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 MGEA5O60502 916 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 CSB-PGBD3P0DP91 1061 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 FBXO18Q8NFZ0 1043 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 SPTLC3Q9NUV7 552 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 MRGBPQ9NV56 204 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 ELL2O00472 640 aaPredicted RBP7.19□□□□□ -1.26
ERCC6-209ENST00000623073 ZEB2O60315 1214 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 BRD1O95696 1058 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 UBA7P41226 1012 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 MXRA7P84157 204 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 TNIP1Q15025 636 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 GLE1Q53GS7 698 aaKnown RBP7.19□□□□□ -1.26
ERCC6-209ENST00000623073 RETREG2Q8NC44 543 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 PDLIM2Q96JY6 352 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 ESYT1Q9BSJ8 1104 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 PRC1O43663 620 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 MSANTD4Q8NCY6 345 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 STAG1Q8WVM7 1258 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 VIPAS39Q9H9C1 493 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 GAPVD1Q14C86 1478 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 FAM135BQ49AJ0 1406 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 SUN1O94901 812 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 IARSP41252 1262 aaKnown RBP7.19□□□□□ -1.26
ERCC6-209ENST00000623073 AACSQ86V21 672 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 VSIG1Q86XK7 387 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 FBXW7Q969H0 707 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 CAPN7Q9Y6W3 813 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 PIK3R4Q99570 1358 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 CCDC194A0A1B0GVG4 234 aa7.19□□□□□ -1.26
ERCC6-209ENST00000623073 SYT10Q6XYQ8 523 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms