RNA–Protein interactions for RNA: ENST00000622093.4

SLIT2-212, Transcript of slit guidance ligand 2, humanhuman

TSL 5 BASIC

Gene SLIT2, Length 6,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-212ENST00000622093 SEPT12Q8IYM1 358 aa13.22□□□□□ -0.29
SLIT2-212ENST00000622093 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
SLIT2-212ENST00000622093 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
SLIT2-212ENST00000622093 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
SLIT2-212ENST00000622093 MAST3O60307 1309 aa13.21□□□□□ -0.29
SLIT2-212ENST00000622093 SDSP20132 328 aa13.21□□□□□ -0.29
SLIT2-212ENST00000622093 GNAQP50148 359 aa13.21□□□□□ -0.29
SLIT2-212ENST00000622093 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
SLIT2-212ENST00000622093 STX6O43752 255 aa13.21□□□□□ -0.3
SLIT2-212ENST00000622093 BACH2Q9BYV9 841 aa13.21□□□□□ -0.3
SLIT2-212ENST00000622093 FAM13AO94988 1023 aa13.21□□□□□ -0.3
SLIT2-212ENST00000622093 KIFC2Q96AC6 838 aa13.21□□□□□ -0.3
SLIT2-212ENST00000622093 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 KIAA0754O94854 1291 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 NBPF7P0C2Y1 421 aaPredicted RBP13.2□□□□□ -0.3
SLIT2-212ENST00000622093 TTF2Q9UNY4 1162 aaKnown RBP13.2□□□□□ -0.3
SLIT2-212ENST00000622093 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 MYO5CQ9NQX4 1742 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 ZBED4O75132 1171 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 CSPG5O95196 566 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 APOBRQ0VD83 1088 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 KRT2P35908 639 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
SLIT2-212ENST00000622093 NEO1Q92859 1461 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 IL13P35225 146 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 LMAN1P49257 510 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 ARHGAP29Q52LW3 1261 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 BRDTQ58F21 947 aaPredicted RBP13.19□□□□□ -0.3
SLIT2-212ENST00000622093 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 KIAA0825Q8IV33 1275 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
SLIT2-212ENST00000622093 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 CFAP43Q8NDM7 1665 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
SLIT2-212ENST00000622093 ZRSR2Q15696 482 aaKnown RBP13.19□□□□□ -0.3
SLIT2-212ENST00000622093 MAEAQ7L5Y9 396 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 HOOK2Q96ED9 719 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
SLIT2-212ENST00000622093 MARCKSP29966 332 aaPredicted RBP13.19□□□□□ -0.3
SLIT2-212ENST00000622093 PDE1AP54750 535 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 CTDSPL2Q05D32 466 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 RRAGBQ5VZM2 374 aa13.19□□□□□ -0.3
SLIT2-212ENST00000622093 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
SLIT2-212ENST00000622093 ANO10Q9NW15 660 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 PRDM1O75626 825 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 KRT13P13646 458 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
SLIT2-212ENST00000622093 CCDC112Q8NEF3 446 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 LRRC27Q9C0I9 530 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 GJC1P36383 396 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 HSP90AA4PQ58FG1 418 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
SLIT2-212ENST00000622093 ERVV-2B6SEH9 535 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 TERF1P54274 439 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 UNC5CLQ8IV45 518 aa13.18□□□□□ -0.3
SLIT2-212ENST00000622093 PHKG2P15735 406 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 NUCB1Q02818 461 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
SLIT2-212ENST00000622093 KCNQ3O43525 872 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 CCDC102AQ96A19 550 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 TMCO5BA8MYB1 307 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 USP48Q86UV5 1035 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 CCDC113Q9H0I3 377 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 AFF2P51816 1311 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 SHANK2Q9UPX8 1470 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 EYA2O00167 538 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 B4E1Z4 1266 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 TOP1P11387 765 aaKnown RBP13.17□□□□□ -0.3
SLIT2-212ENST00000622093 RBM25P49756 843 aaKnown RBP13.17□□□□□ -0.3
SLIT2-212ENST00000622093 ASIC1P78348 528 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
SLIT2-212ENST00000622093 DNMT1P26358 1616 aaKnown RBP13.16□□□□□ -0.3
SLIT2-212ENST00000622093 CLRN2A0PK11 232 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 SSFA2P28290 1259 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 NOP2P46087 812 aaKnown RBP13.16□□□□□ -0.3
SLIT2-212ENST00000622093 MFSD14BQ5SR56 506 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 CEP85Q6P2H3 762 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 VAMP4O75379 141 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 SIK1P57059 783 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 SPATA5Q8NB90 893 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 USP19O94966 1318 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 CTSWP56202 376 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 ANKRD44Q8N8A2 993 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 ZMYND15Q9H091 742 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 ZBTB7AO95365 584 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
SLIT2-212ENST00000622093 PABPN1LA6NDY0 278 aaKnown RBP13.15□□□□□ -0.3
SLIT2-212ENST00000622093 TMEM110-MUSTN1A8MSY1 372 aa13.15□□□□□ -0.3
SLIT2-212ENST00000622093 DHX58Q96C10 678 aa13.15□□□□□ -0.3
SLIT2-212ENST00000622093 KDM6BO15054 1643 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms