RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 KMT5BQ4FZB7 885 aa18.67■□□□□ 0.58
DKC1-213ENST00000620277 SMARCC2Q8TAQ2 1214 aa18.67■□□□□ 0.58
DKC1-213ENST00000620277 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
DKC1-213ENST00000620277 UTYO14607 1347 aa18.67■□□□□ 0.58
DKC1-213ENST00000620277 SLC3A2P08195 630 aaKnown RBP18.67■□□□□ 0.58
DKC1-213ENST00000620277 CCZ1BP86790 482 aa18.67■□□□□ 0.58
DKC1-213ENST00000620277 CCZ1P86791 482 aaPredicted RBP18.67■□□□□ 0.58
DKC1-213ENST00000620277 FOXO4P98177 505 aa18.67■□□□□ 0.58
DKC1-213ENST00000620277 RBM43Q6ZSC3 357 aaKnown RBP18.67■□□□□ 0.58
DKC1-213ENST00000620277 PDILTQ8N807 584 aa18.67■□□□□ 0.58
DKC1-213ENST00000620277 RNF113AO15541 343 aaKnown RBP18.66■□□□□ 0.58
DKC1-213ENST00000620277 RRP12Q5JTH9 1297 aaKnown RBP18.66■□□□□ 0.58
DKC1-213ENST00000620277 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
DKC1-213ENST00000620277 CGNQ9P2M7 1197 aaKnown RBP18.66■□□□□ 0.58
DKC1-213ENST00000620277 CTNNA3Q9UI47 895 aa18.66■□□□□ 0.58
DKC1-213ENST00000620277 SPTLC2O15270 562 aa18.66■□□□□ 0.58
DKC1-213ENST00000620277 TSGA10IPQ3SY00 556 aa18.66■□□□□ 0.58
DKC1-213ENST00000620277 ZNF202O95125 648 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 EXOSC10Q01780 885 aaKnown RBP18.65■□□□□ 0.58
DKC1-213ENST00000620277 FBXO38Q6PIJ6 1188 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 ENGASEQ8NFI3 743 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 CWC25Q9NXE8 425 aaPredicted RBP18.65■□□□□ 0.58
DKC1-213ENST00000620277 LRRC37A3O60309 1634 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 LTN1O94822 1766 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 SERPINC1P01008 464 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 PNOCQ13519 176 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 NBPF11Q86T75 865 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 CREBRFQ8IUR6 639 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 CCAR2Q8N163 923 aaKnown RBP18.65■□□□□ 0.58
DKC1-213ENST00000620277 ZKSCAN3Q9BRR0 538 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 NFXL1Q6ZNB6 911 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 DPF2Q92785 391 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 DNAI1Q9UI46 699 aa18.65■□□□□ 0.58
DKC1-213ENST00000620277 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 FMR1NBQ8N0W7 255 aaPredicted RBP18.64■□□□□ 0.57
DKC1-213ENST00000620277 KIF18AQ8NI77 898 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 KIAA1468Q9P260 1216 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 FOXN1O15353 648 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 SFPQP23246 707 aaKnown RBP eCLIP18.64■□□□□ 0.57
DKC1-213ENST00000620277 ZNF827Q17R98 1081 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 ARMCX5Q6P1M9 558 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 LINC00301Q8NCQ3 95 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 XAGE2Q96GT9 111 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 ZSWIM4Q9H7M6 989 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 PAXBP1Q9Y5B6 917 aa18.64■□□□□ 0.57
DKC1-213ENST00000620277 ZBTB22O15209 634 aa18.63■□□□□ 0.57
DKC1-213ENST00000620277 WDHD1O75717 1129 aaPredicted RBP18.63■□□□□ 0.57
DKC1-213ENST00000620277 IMMTQ16891 758 aaKnown RBP18.63■□□□□ 0.57
DKC1-213ENST00000620277 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
DKC1-213ENST00000620277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.63■□□□□ 0.57
DKC1-213ENST00000620277 EYA2O00167 538 aa18.63■□□□□ 0.57
DKC1-213ENST00000620277 PLBD2Q8NHP8 589 aa18.63■□□□□ 0.57
DKC1-213ENST00000620277 NAT10Q9H0A0 1025 aaKnown RBP18.63■□□□□ 0.57
DKC1-213ENST00000620277 COBLO75128 1261 aa18.63■□□□□ 0.57
DKC1-213ENST00000620277 HMGB1P09429 215 aaKnown RBP18.63■□□□□ 0.57
DKC1-213ENST00000620277 PFKFB1P16118 471 aa18.63■□□□□ 0.57
DKC1-213ENST00000620277 CCDC158Q5M9N0 1113 aa18.63■□□□□ 0.57
DKC1-213ENST00000620277 UTP14AQ9BVJ6 771 aaKnown RBP18.63■□□□□ 0.57
DKC1-213ENST00000620277 KDM6AO15550 1401 aaPredicted RBP18.62■□□□□ 0.57
DKC1-213ENST00000620277 B4E1Z4 1266 aa18.62■□□□□ 0.57
DKC1-213ENST00000620277 TMEM232C9JQI7 657 aa18.62■□□□□ 0.57
DKC1-213ENST00000620277 ZNF213O14771 459 aa18.62■□□□□ 0.57
DKC1-213ENST00000620277 E4F1Q66K89 784 aaPredicted RBP18.62■□□□□ 0.57
DKC1-213ENST00000620277 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
DKC1-213ENST00000620277 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
DKC1-213ENST00000620277 MYSM1Q5VVJ2 828 aa18.62■□□□□ 0.57
DKC1-213ENST00000620277 MRFAP1L1Q96HT8 127 aa18.62■□□□□ 0.57
DKC1-213ENST00000620277 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
DKC1-213ENST00000620277 URI1O94763 535 aaPredicted RBP18.61■□□□□ 0.57
DKC1-213ENST00000620277 ANKARQ7Z5J8 1434 aa18.61■□□□□ 0.57
DKC1-213ENST00000620277 CTAGE5O15320 804 aa18.61■□□□□ 0.57
DKC1-213ENST00000620277 GRAMD1CQ8IYS0 662 aa18.61■□□□□ 0.57
DKC1-213ENST00000620277 hCG_1642624A0A1W2PR95 340 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 POLR3GO15318 223 aaPredicted RBP18.6■□□□□ 0.57
DKC1-213ENST00000620277 RABL6Q3YEC7 729 aaPredicted RBP18.6■□□□□ 0.57
DKC1-213ENST00000620277 SLC9C2Q5TAH2 1124 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 TRMT44Q8IYL2 757 aaKnown RBP18.6■□□□□ 0.57
DKC1-213ENST00000620277 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 IQSEC3Q9UPP2 1182 aaPredicted RBP18.6■□□□□ 0.57
DKC1-213ENST00000620277 GPAA1O43292 621 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 ADALQ6DHV7 355 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 HELLSQ9NRZ9 838 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 OGFRQ9NZT2 677 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 MROH7-TTC4A0A0A0MT08 1334 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 IL15P40933 162 aaPredicted RBP18.6■□□□□ 0.57
DKC1-213ENST00000620277 LLPHQ9BRT6 129 aaKnown RBP18.6■□□□□ 0.57
DKC1-213ENST00000620277 DSCC1Q9BVC3 393 aa18.6■□□□□ 0.57
DKC1-213ENST00000620277 CASP7P55210 303 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 ANTXR2P58335 489 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 METTL24Q5JXM2 366 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 FBXO18Q8NFZ0 1043 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 PPP1R13BQ96KQ4 1090 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 ALDH8A1Q9H2A2 487 aaPredicted RBP18.59■□□□□ 0.57
DKC1-213ENST00000620277 SYKP43405 635 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 FANCCQ00597 558 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 CPLX3Q8WVH0 158 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 DCAF5Q96JK2 942 aa18.59■□□□□ 0.57
DKC1-213ENST00000620277 PALLDQ8WX93 1383 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms