RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 NEUROD6Q96NK8 337 aa15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 GOLPH3LQ9H4A5 285 aa15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.91■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ATP5J2-PTCD1G3V325 749 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 MARCKSP29966 332 aaPredicted RBP15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 DDX46Q7L014 1031 aaKnown RBP15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 PPP1R13BQ96KQ4 1090 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 TULP1O00294 542 aaPredicted RBP15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 A1BGP04217 495 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ANKRD1Q15327 319 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 DPCR1Q3MIW9 517 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 EVI5LQ96CN4 794 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CCZ1BP86790 482 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 CCZ1P86791 482 aaPredicted RBP15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 NEK1Q96PY6 1258 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 MYD88Q99836 296 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 ASAP1Q9ULH1 1129 aa15.9■□□□□ 0.14
CNTNAP3B-215ENST00000619138 RPS6KB1P23443 525 aa15.89■□□□□ 0.13
CNTNAP3B-215ENST00000619138 SMARCE1Q969G3 411 aa15.89■□□□□ 0.13
CNTNAP3B-215ENST00000619138 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
CNTNAP3B-215ENST00000619138 CPLX3Q8WVH0 158 aa15.89■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ZBTB3Q9H5J0 574 aa15.89■□□□□ 0.13
CNTNAP3B-215ENST00000619138 PLEKHA4Q9H4M7 779 aa15.89■□□□□ 0.13
CNTNAP3B-215ENST00000619138 GJB4Q9NTQ9 266 aa15.89■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ROBO1Q9Y6N7 1651 aa15.89■□□□□ 0.13
CNTNAP3B-215ENST00000619138 NEMFO60524 1076 aa15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 PUF60Q9UHX1 559 aaKnown RBP15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ATP1A3P13637 1013 aa15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 PHRF1Q9P1Y6 1649 aaKnown RBP15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 HAND2P61296 217 aa15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 IQCB1Q15051 598 aa15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 NECTIN1Q15223 517 aa15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 E4F1Q66K89 784 aaPredicted RBP15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 EAF2Q96CJ1 260 aaPredicted RBP15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 DDX21Q9NR30 783 aaKnown RBP eCLIP15.88■□□□□ 0.13
CNTNAP3B-215ENST00000619138 SRRTQ9BXP5 876 aaKnown RBP15.87■□□□□ 0.13
CNTNAP3B-215ENST00000619138 HOXB7P09629 217 aa15.87■□□□□ 0.13
CNTNAP3B-215ENST00000619138 PTPDC1A2A3K4 754 aa15.87■□□□□ 0.13
CNTNAP3B-215ENST00000619138 TOB2Q14106 344 aaPredicted RBP15.87■□□□□ 0.13
CNTNAP3B-215ENST00000619138 NCAPD2Q15021 1401 aa15.87■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ZSCAN26Q16670 478 aa15.87■□□□□ 0.13
CNTNAP3B-215ENST00000619138 KSR2Q6VAB6 950 aa15.87■□□□□ 0.13
CNTNAP3B-215ENST00000619138 RABEP2Q9H5N1 569 aa15.87■□□□□ 0.13
CNTNAP3B-215ENST00000619138 CCDC102AQ96A19 550 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 VPS18Q9P253 973 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 SLC3A2P08195 630 aaKnown RBP15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 PLA2G4AP47712 749 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 GSDMDP57764 484 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 SYNE3Q6ZMZ3 975 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 SYCP1Q15431 976 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ANKRD13DQ6ZTN6 518 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 CERKQ8TCT0 537 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 MRFAP1L1Q96HT8 127 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 DESI2Q9BSY9 194 aa15.86■□□□□ 0.13
CNTNAP3B-215ENST00000619138 NYAP1Q6ZVC0 841 aa15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 UBASH3AP57075 661 aa15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 SMC1AQ14683 1233 aaKnown RBP15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 DNAJC10Q8IXB1 793 aa15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 PIGBQ92521 554 aa15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ZNF396Q96N95 335 aaPredicted RBP15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 CPLX1O14810 134 aa15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ARMCX5Q6P1M9 558 aa15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 OVOS2A0A0G2JMS6 1433 aa15.85■□□□□ 0.13
CNTNAP3B-215ENST00000619138 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 USP54Q70EL1 1684 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 TOP1P11387 765 aaKnown RBP15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 CYP2C19P33261 490 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 DHX40Q8IX18 779 aaKnown RBP15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 RASSF4Q9H2L5 321 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 LZTFL1Q9NQ48 299 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 FEZ2Q9UHY8 353 aaPredicted RBP15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 KIF2AO00139 706 aaPredicted RBP15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 CASQ1P31415 396 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 NDUFA8P51970 172 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 SCRN1Q12765 414 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 WWC2Q6AWC2 1192 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 LEKR1Q6ZMV7 388 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 LCMT1Q9UIC8 334 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 ELP1O95163 1332 aa15.84■□□□□ 0.13
CNTNAP3B-215ENST00000619138 RESTQ13127 1097 aa15.83■□□□□ 0.13
CNTNAP3B-215ENST00000619138 HSP90AB3PQ58FF7 597 aa15.83■□□□□ 0.13
CNTNAP3B-215ENST00000619138 CCDC12Q8WUD4 166 aaPredicted RBP15.83■□□□□ 0.13
CNTNAP3B-215ENST00000619138 MRPS27Q92552 414 aaKnown RBP15.83■□□□□ 0.13
CNTNAP3B-215ENST00000619138 IRX3P78415 501 aaPredicted RBP15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 FAM160A1Q05DH4 1040 aa15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 MAP4K1Q92918 833 aa15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 AK7Q96M32 723 aa15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 ARFGAP3Q9NP61 516 aa15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 USP21Q9UK80 565 aa15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 HSPA1LP34931 641 aa15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 FAM193AP78312 1265 aa15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 SPECC1Q5M775 1068 aa15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 GPHNQ9NQX3 736 aaPredicted RBP15.83■□□□□ 0.12
CNTNAP3B-215ENST00000619138 RHOXF2BP0C7M4 288 aa15.82■□□□□ 0.12
CNTNAP3B-215ENST00000619138 ETF1P62495 437 aaKnown RBP15.82■□□□□ 0.12
CNTNAP3B-215ENST00000619138 RHOXF2Q9BQY4 288 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms