RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 DDB1Q16531 1140 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 WDR44Q5JSH3 913 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 MRPS27Q92552 414 aaKnown RBP12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 PRIMPOLQ96LW4 560 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 MBIPQ9NS73 344 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 AGTPBP1Q9UPW5 1226 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 Q6ZUG5 572 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 UBXN1Q04323 297 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 PRPF31Q8WWY3 499 aaKnown RBP12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 ACSBG1Q96GR2 724 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 TUBB4AP04350 444 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 CCDC114Q96M63 670 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 MCM9Q9NXL9 1143 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 STX10O60499 249 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 MAGEB6Q8N7X4 407 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 ZSWIM4Q9H7M6 989 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 TSPOAP1O95153 1857 aa12.58□□□□□ -0.39
CCDC144B-208ENST00000618081 ACEP12821 1306 aa12.58□□□□□ -0.39
CCDC144B-208ENST00000618081 GTF2F1P35269 517 aaKnown RBP eCLIP12.58□□□□□ -0.39
CCDC144B-208ENST00000618081 KIFC2Q96AC6 838 aa12.58□□□□□ -0.39
CCDC144B-208ENST00000618081 SRRTQ9BXP5 876 aaKnown RBP12.58□□□□□ -0.39
CCDC144B-208ENST00000618081 PPIP5K1Q6PFW1 1433 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 ATP5DP30049 168 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 GEN1Q17RS7 908 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 ERCC6LQ2NKX8 1250 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 CCDC65Q8IXS2 484 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 CCDC42Q96M95 316 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 STK10O94804 968 aaKnown RBP12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 DYNC1I1O14576 645 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 TNRQ92752 1358 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 PKNOX2Q96KN3 472 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 TFCP2L1Q9NZI6 479 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 TMOD4Q9NZQ9 345 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 STK24Q9Y6E0 443 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 E7EVH7 732 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 NOD1Q9Y239 953 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
CCDC144B-208ENST00000618081 KDM5AP29375 1690 aaKnown RBP12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 UBAP1LF5GYI3 381 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 MCM7P33993 719 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 INF2Q27J81 1249 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 XAGE3Q8WTP9 111 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 ARHGEF10LQ9HCE6 1279 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 ABCC1P33527 1531 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 FNBP1Q96RU3 617 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 PARP1P09874 1014 aaKnown RBP12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 SYT1P21579 422 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 ARID4AP29374 1257 aaPredicted RBP12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 NUCB1Q02818 461 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 SEL1L2Q5TEA6 688 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 CERS3Q8IU89 383 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 TRIM6Q9C030 488 aaPredicted RBP12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 KRT5P13647 590 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 ZSCAN23Q3MJ62 389 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 HOOK2Q96ED9 719 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 FAM184BQ9ULE4 1060 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 KMT5BQ4FZB7 885 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 BRF1Q92994 677 aa12.57□□□□□ -0.4
CCDC144B-208ENST00000618081 MNAT1P51948 309 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 MARCKSP29966 332 aaPredicted RBP12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 RFX1P22670 979 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 AFAP1L2Q8N4X5 818 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 PPP1R2P41236 205 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 ABCA10Q8WWZ4 1543 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 STIM2Q9P246 746 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 GIPC1O14908 333 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 CNGA1P29973 690 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 TSHZ3Q63HK5 1081 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 IFT74Q96LB3 600 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 SELENOSQ9BQE4 189 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 AKAP4Q5JQC9 854 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 DHX58Q96C10 678 aa12.56□□□□□ -0.4
CCDC144B-208ENST00000618081 TTC41PQ6P2S7 1318 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 SWAP70Q9UH65 585 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 IQSEC3Q9UPP2 1182 aaPredicted RBP12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 PFDN4Q9NQP4 134 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 GLT8D2Q9H1C3 349 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 SPTLC2O15270 562 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 MCM6Q14566 821 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms