RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PIGBQ92521 554 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 PDRG1Q9NUG6 133 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 HMGB1P09429 215 aaKnown RBP12.62□□□□□ -0.39
POLR2A-209ENST00000617998 GLG1Q92896 1179 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 EVI5LQ96CN4 794 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 NACA2Q9H009 215 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 PHAXQ9H814 394 aaKnown RBP12.62□□□□□ -0.39
POLR2A-209ENST00000617998 RIMS1Q86UR5 1692 aaKnown RBP12.62□□□□□ -0.39
POLR2A-209ENST00000617998 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 TGFBRAP1Q8WUH2 860 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
POLR2A-209ENST00000617998 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
POLR2A-209ENST00000617998 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 SMC2O95347 1197 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 PARP1P09874 1014 aaKnown RBP12.61□□□□□ -0.39
POLR2A-209ENST00000617998 LPIN2Q92539 896 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 TRIM75PA6NK02 468 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 BRPF1P55201 1214 aaPredicted RBP12.61□□□□□ -0.39
POLR2A-209ENST00000617998 ZNF804BA4D1E1 1349 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 MYO3BQ8WXR4 1341 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 CTSWP56202 376 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 AOC3Q16853 763 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 KIF28PB7ZC32 967 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
POLR2A-209ENST00000617998 USP6P35125 1406 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 CETN1Q12798 172 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 PUF60Q9UHX1 559 aaKnown RBP12.61□□□□□ -0.39
POLR2A-209ENST00000617998 NR2E3Q9Y5X4 410 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 UQCRHP07919 91 aa12.61□□□□□ -0.39
POLR2A-209ENST00000617998 HSP90AA2PQ14568 343 aaPredicted RBP12.61□□□□□ -0.39
POLR2A-209ENST00000617998 SSH1Q8WYL5 1049 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 TSG101Q99816 390 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 ARHGEF12Q9NZN5 1544 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 KINO60870 393 aaKnown RBP12.6□□□□□ -0.39
POLR2A-209ENST00000617998 GNPTABQ3T906 1256 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 SMC1AQ14683 1233 aaKnown RBP12.6□□□□□ -0.39
POLR2A-209ENST00000617998 MAP3K4Q9Y6R4 1608 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 DPEP1P16444 411 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 CALML3P27482 149 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 KIF4BQ2VIQ3 1234 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
POLR2A-209ENST00000617998 SMARCA5O60264 1052 aaPredicted RBP12.6□□□□□ -0.39
POLR2A-209ENST00000617998 IARSP41252 1262 aaKnown RBP12.6□□□□□ -0.39
POLR2A-209ENST00000617998 DKC1O60832 514 aaKnown RBP eCLIP12.59□□□□□ -0.39
POLR2A-209ENST00000617998 ALAS1P13196 640 aa12.59□□□□□ -0.39
POLR2A-209ENST00000617998 MICU3Q86XE3 530 aa12.59□□□□□ -0.39
POLR2A-209ENST00000617998 NKTRP30414 1462 aaKnown RBP12.59□□□□□ -0.39
POLR2A-209ENST00000617998 KBTBD13C9JR72 458 aa12.59□□□□□ -0.39
POLR2A-209ENST00000617998 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
POLR2A-209ENST00000617998 PNMA2Q9UL42 364 aa12.59□□□□□ -0.39
POLR2A-209ENST00000617998 ERBB3P21860 1342 aa12.59□□□□□ -0.39
POLR2A-209ENST00000617998 SPATA31A1Q5TZJ5 1347 aa12.59□□□□□ -0.39
POLR2A-209ENST00000617998 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
POLR2A-209ENST00000617998 FHDC1Q9C0D6 1143 aaPredicted RBP12.59□□□□□ -0.39
POLR2A-209ENST00000617998 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
POLR2A-209ENST00000617998 PABPN1LA6NDY0 278 aaKnown RBP12.59□□□□□ -0.39
POLR2A-209ENST00000617998 USP37Q86T82 979 aa12.59□□□□□ -0.39
POLR2A-209ENST00000617998 EYA2O00167 538 aa12.58□□□□□ -0.39
POLR2A-209ENST00000617998 TLR3O15455 904 aaKnown RBP12.58□□□□□ -0.39
POLR2A-209ENST00000617998 TRPC6Q9Y210 931 aa12.58□□□□□ -0.39
POLR2A-209ENST00000617998 CRB1P82279 1406 aa12.58□□□□□ -0.4
POLR2A-209ENST00000617998 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
POLR2A-209ENST00000617998 GCKRQ14397 625 aa12.58□□□□□ -0.4
POLR2A-209ENST00000617998 NAT10Q9H0A0 1025 aaKnown RBP12.58□□□□□ -0.4
POLR2A-209ENST00000617998 ME1P48163 572 aa12.58□□□□□ -0.4
POLR2A-209ENST00000617998 ARHGEF16Q5VV41 709 aa12.58□□□□□ -0.4
POLR2A-209ENST00000617998 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
POLR2A-209ENST00000617998 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
POLR2A-209ENST00000617998 GRAPQ13588 217 aa12.58□□□□□ -0.4
POLR2A-209ENST00000617998 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
POLR2A-209ENST00000617998 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
POLR2A-209ENST00000617998 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 NLRX1Q86UT6 975 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 SAMD9LQ8IVG5 1584 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 BABAM1Q9NWV8 329 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 TFCP2Q12800 502 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 GZF1Q9H116 711 aaPredicted RBP12.57□□□□□ -0.4
POLR2A-209ENST00000617998 CARMIL3Q8ND23 1372 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 STX6O43752 255 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 ZNF594Q96JF6 807 aaPredicted RBP12.57□□□□□ -0.4
POLR2A-209ENST00000617998 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 C22orf23Q9BZE7 217 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 IMPG2Q9BZV3 1241 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 MCM2P49736 904 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 BRIP1Q9BX63 1249 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
POLR2A-209ENST00000617998 SPATA31A5Q5VU36 1347 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 SPATA31A7Q8IWB4 1347 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 MBD4O95243 580 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 MIGA2Q7L4E1 593 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 BICC1Q9H694 974 aaKnown RBP12.56□□□□□ -0.4
POLR2A-209ENST00000617998 CNOT7Q9UIV1 285 aaKnown RBP12.56□□□□□ -0.4
POLR2A-209ENST00000617998 Q3C1V9 767 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 KIAA1841Q6NSI8 718 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms