RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 STX6O43752 255 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 MCAMP43121 646 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 ZMYM1Q5SVZ6 1142 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 C17orf53Q8N3J3 647 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 CNPY2Q9Y2B0 182 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 PPFIA3O75145 1194 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 PSMA5P28066 241 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 CHST3Q7LGC8 479 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 KRT27Q7Z3Y8 459 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 NUP98P52948 1817 aa13.49□□□□□ -0.25
PCDHGA9-202ENST00000616887 MYH14Q7Z406 1995 aaKnown RBP13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 FOXP2O15409 715 aa13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 HSPD1P10809 573 aaKnown RBP13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 NEK1Q96PY6 1258 aa13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 ERVV-1B6SEH8 477 aa13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 RNF113AO15541 343 aaKnown RBP13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 PDE8AO60658 829 aa13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 CAMTA2O94983 1202 aa13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 ZSCAN22P10073 491 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 HMG20BQ9P0W2 317 aa13.48□□□□□ -0.25
PCDHGA9-202ENST00000616887 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 Q6ZUG5 572 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 PUS7LQ9H0K6 701 aaKnown RBP13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 MTMR6Q9Y217 621 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 AKAP2Q9Y2D5 859 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 JAK2O60674 1132 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 PHKA1P46020 1223 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 HAND2P61296 217 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 USP48Q86UV5 1035 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 FERMT3Q86UX7 667 aa13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA9-202ENST00000616887 FIBPO43427 364 aa13.46□□□□□ -0.25
PCDHGA9-202ENST00000616887 F13A1P00488 732 aa13.46□□□□□ -0.25
PCDHGA9-202ENST00000616887 TSGA10IPQ3SY00 556 aa13.46□□□□□ -0.25
PCDHGA9-202ENST00000616887 LINC00116Q8NCU8 138 aa13.46□□□□□ -0.25
PCDHGA9-202ENST00000616887 HELLSQ9NRZ9 838 aa13.46□□□□□ -0.25
PCDHGA9-202ENST00000616887 NIP7Q9Y221 180 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCDHGA9-202ENST00000616887 COL4A1P02462 1669 aa13.46□□□□□ -0.25
PCDHGA9-202ENST00000616887 ANKRD36CQ5JPF3 1778 aa13.46□□□□□ -0.25
PCDHGA9-202ENST00000616887 CDC37L1Q7L3B6 337 aa13.46□□□□□ -0.26
PCDHGA9-202ENST00000616887 PIBF1Q8WXW3 757 aa13.46□□□□□ -0.26
PCDHGA9-202ENST00000616887 BRF1Q92994 677 aa13.46□□□□□ -0.26
PCDHGA9-202ENST00000616887 ZSCAN31Q96LW9 406 aaPredicted RBP13.46□□□□□ -0.26
PCDHGA9-202ENST00000616887 PDE8BO95263 885 aa13.45□□□□□ -0.26
PCDHGA9-202ENST00000616887 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA9-202ENST00000616887 DNM1Q05193 864 aaKnown RBP13.45□□□□□ -0.26
PCDHGA9-202ENST00000616887 ILDR2Q71H61 639 aa13.45□□□□□ -0.26
PCDHGA9-202ENST00000616887 GPHNQ9NQX3 736 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA9-202ENST00000616887 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
PCDHGA9-202ENST00000616887 GOLGB1Q14789 3259 aaKnown RBP13.45□□□□□ -0.26
PCDHGA9-202ENST00000616887 TCHHQ07283 1943 aa13.45□□□□□ -0.26
PCDHGA9-202ENST00000616887 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 UTP14AQ9BVJ6 771 aaKnown RBP13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 PIH1D3Q9NQM4 214 aaKnown RBP13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 CICQ96RK0 1608 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 NTSR2O95665 410 aa13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 CCDC102BQ68D86 513 aa13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 DSCC1Q9BVC3 393 aa13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 TTC12Q9H892 705 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 DENND2AQ9ULE3 1009 aa13.44□□□□□ -0.26
PCDHGA9-202ENST00000616887 E7EWF7 191 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 FOSBP53539 338 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 AMIGO3Q86WK7 504 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 DDX11Q96FC9 970 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 IDH1O75874 414 aaKnown RBP13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 APOBRQ0VD83 1088 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 SCRN1Q12765 414 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 KRT32Q14532 448 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 LARP1BQ659C4 914 aaKnown RBP13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 MYH3P11055 1940 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 ZNF831Q5JPB2 1677 aa13.43□□□□□ -0.26
PCDHGA9-202ENST00000616887 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
PCDHGA9-202ENST00000616887 GPAA1O43292 621 aa13.42□□□□□ -0.26
PCDHGA9-202ENST00000616887 ANKRD1Q15327 319 aa13.42□□□□□ -0.26
PCDHGA9-202ENST00000616887 SLC9C2Q5TAH2 1124 aa13.42□□□□□ -0.26
PCDHGA9-202ENST00000616887 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
PCDHGA9-202ENST00000616887 NCOA5Q9HCD5 579 aaKnown RBP13.42□□□□□ -0.26
PCDHGA9-202ENST00000616887 FGAP02671 866 aa13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 CCT2P78371 535 aaKnown RBP13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 FAM196AQ6ZSG2 479 aa13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 RAB11FIP4Q86YS3 637 aa13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 FGFR2P21802 821 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms