RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 TTLL11Q8NHH1 800 aa16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 ERCC4Q92889 916 aaPredicted RBP16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 CFAP45Q9UL16 551 aa16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 GPAA1O43292 621 aa16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 MCM5P33992 734 aa16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 SASS6Q6UVJ0 657 aa16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 DNAJC25Q9H1X3 360 aa16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 ZSCAN16Q9H4T2 348 aaPredicted RBP16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 SHANK3Q9BYB0 1731 aa16.29■□□□□ 0.2
CACNA1C-231ENST00000616390 ANKRD18BA2A2Z9 1011 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 FOXP2O15409 715 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 POLR3DP05423 398 aaPredicted RBP16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 DRC7Q8IY82 874 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 PRC1O43663 620 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 RXRAP19793 462 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 RGS22Q8NE09 1264 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 FAM200AQ8TCP9 573 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
CACNA1C-231ENST00000616390 KLF18A0A0U1RQI7 1052 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 ZNF213O14771 459 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 CSF1RP07333 972 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 CBX8Q9HC52 389 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 ME1P48163 572 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 CLSTN2Q9H4D0 955 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 RIPOR2Q9Y4F9 1068 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 TNS2Q63HR2 1409 aa16.27■□□□□ 0.2
CACNA1C-231ENST00000616390 UQCRHLA0A096LP55 91 aa16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 UQCRHP07919 91 aa16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 TPM2P07951 284 aa16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 CTSWP56202 376 aa16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 HMGN5P82970 282 aaKnown RBP16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 LRRFIP1Q32MZ4 808 aaKnown RBP16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 ACSBG1Q96GR2 724 aa16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 LLPHQ9BRT6 129 aaKnown RBP16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 CTNNA3Q9UI47 895 aa16.27■□□□□ 0.19
CACNA1C-231ENST00000616390 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 GOLGA8BA8MQT2 603 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 EXOC5O00471 708 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 CYP19A1P11511 503 aaPredicted RBP16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 PHKA1P46020 1223 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 APPBP2Q92624 585 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 MYO5AQ9Y4I1 1855 aaKnown RBP16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 TRIM28Q13263 835 aaKnown RBP16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 CCDC144CPQ8IYA2 1237 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 INCENPQ9NQS7 918 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 TMEM51Q9NW97 253 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 FAM13BQ9NYF5 915 aa16.26■□□□□ 0.19
CACNA1C-231ENST00000616390 CPLX1O14810 134 aa16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 FDPSP14324 419 aaKnown RBP16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 ADD1P35611 737 aaKnown RBP16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 NOLC1Q14978 699 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 ARID3AQ99856 593 aa16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 TRIM5Q9C035 493 aa16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 KIF3AQ9Y496 699 aa16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 ZNF165P49910 485 aa16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 ZNF274Q96GC6 653 aaPredicted RBP16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 GOLPH3LQ9H4A5 285 aa16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 CARMIL3Q8ND23 1372 aa16.25■□□□□ 0.19
CACNA1C-231ENST00000616390 NCOA7Q8NI08 942 aa16.24■□□□□ 0.19
CACNA1C-231ENST00000616390 AGXT2Q9BYV1 514 aa16.24■□□□□ 0.19
CACNA1C-231ENST00000616390 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
CACNA1C-231ENST00000616390 NAA16Q6N069 864 aaPredicted RBP16.24■□□□□ 0.19
CACNA1C-231ENST00000616390 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNA1C-231ENST00000616390 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNA1C-231ENST00000616390 ITGB4P16144 1822 aa16.24■□□□□ 0.19
CACNA1C-231ENST00000616390 PAPPAQ13219 1627 aa16.24■□□□□ 0.19
CACNA1C-231ENST00000616390 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 CCDC102BQ68D86 513 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 ILDR1Q86SU0 546 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 C8orf76Q96K31 380 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 NRBP1Q9UHY1 535 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 PYCARDQ9ULZ3 195 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 ZNF532Q9HCE3 1301 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 PTGS1P23219 599 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 ANTXR2P58335 489 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 TRDNQ13061 729 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 CCDC73Q6ZRK6 1079 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 FAM43BQ6ZT52 329 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 PLA2G12BQ9BX93 195 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
CACNA1C-231ENST00000616390 RIC1Q4ADV7 1423 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 UBN2Q6ZU65 1347 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 A0A1B0GVL5 298 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 CLSTN1O94985 981 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 PDE8BO95263 885 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 FSIP1Q8NA03 581 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms